Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | FPL17_RS14190 | Genome accession | NZ_CP041970 |
| Coordinates | 3082058..3083245 (+) | Length | 395 a.a. |
| NCBI ID | WP_159885686.1 | Uniprot ID | - |
| Organism | Acinetobacter dispersus strain NCCP 16014 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3077058..3088245
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPL17_RS14165 (FPL17_14325) | - | 3077663..3078136 (-) | 474 | WP_159885684.1 | hypothetical protein | - |
| FPL17_RS14170 (FPL17_14330) | guaD | 3078324..3079640 (+) | 1317 | WP_005186277.1 | guanine deaminase | - |
| FPL17_RS14175 (FPL17_14335) | hpt | 3079867..3080397 (+) | 531 | WP_005146279.1 | hypoxanthine phosphoribosyltransferase | - |
| FPL17_RS14180 (FPL17_14340) | - | 3080625..3080876 (+) | 252 | WP_005146280.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| FPL17_RS14185 (FPL17_14345) | - | 3080936..3081634 (-) | 699 | WP_005186276.1 | DsbC family protein | - |
| FPL17_RS14190 (FPL17_14350) | pilU | 3082058..3083245 (+) | 1188 | WP_159885686.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FPL17_RS14195 (FPL17_14355) | mnmE | 3083304..3084659 (-) | 1356 | WP_005186269.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| FPL17_RS14200 (FPL17_14360) | yidC | 3084774..3086531 (-) | 1758 | WP_159885688.1 | membrane protein insertase YidC | - |
| FPL17_RS14205 (FPL17_14365) | yidD | 3086537..3086857 (-) | 321 | WP_159885690.1 | membrane protein insertion efficiency factor YidD | - |
| FPL17_RS14210 (FPL17_14370) | rnpA | 3086867..3087262 (-) | 396 | WP_004656857.1 | ribonuclease P protein component | - |
| FPL17_RS14215 (FPL17_14375) | rpmH | 3087290..3087424 (-) | 135 | WP_000831329.1 | 50S ribosomal protein L34 | - |
Sequence
Protein
Download Length: 395 a.a. Molecular weight: 44778.32 Da Isoelectric Point: 6.3761
>NTDB_id=375091 FPL17_RS14190 WP_159885686.1 3082058..3083245(+) (pilU) [Acinetobacter dispersus strain NCCP 16014]
MYNAELLEEAKTFMFHMLTKVVEYGGSDLFITADFPPSIKLQGLMRPLGQQALTADKTKLFAYSLMNEKQRQEFETEWEC
NFAINVPNVSRFRVNVFKQQLQIGMVIRTITSEIPTFQKLKLPESLKNVIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWQHALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTQDGKGRRAAIEILLNTPLIGDNILKGQFHALKEIMSKS
RELGMQTFDQALFELYNEGAINYDEALRNADSVNELRLQIKLKSTRQEGSPVAMMTALNVVQEEKPEEEQQTEDQ
MYNAELLEEAKTFMFHMLTKVVEYGGSDLFITADFPPSIKLQGLMRPLGQQALTADKTKLFAYSLMNEKQRQEFETEWEC
NFAINVPNVSRFRVNVFKQQLQIGMVIRTITSEIPTFQKLKLPESLKNVIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWQHALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTQDGKGRRAAIEILLNTPLIGDNILKGQFHALKEIMSKS
RELGMQTFDQALFELYNEGAINYDEALRNADSVNELRLQIKLKSTRQEGSPVAMMTALNVVQEEKPEEEQQTEDQ
Nucleotide
Download Length: 1188 bp
>NTDB_id=375091 FPL17_RS14190 WP_159885686.1 3082058..3083245(+) (pilU) [Acinetobacter dispersus strain NCCP 16014]
ATGTATAACGCGGAATTATTAGAAGAAGCCAAAACCTTTATGTTTCATATGCTCACCAAGGTGGTGGAATATGGCGGTTC
AGATTTATTTATCACCGCAGATTTTCCACCGAGCATTAAACTACAAGGCTTAATGCGACCTTTAGGGCAACAAGCCTTAA
CAGCAGATAAAACCAAGTTGTTTGCCTATAGCCTCATGAATGAAAAACAACGCCAAGAGTTTGAAACTGAATGGGAATGT
AATTTTGCAATCAATGTTCCGAATGTTTCACGTTTTCGTGTCAATGTATTTAAACAACAGCTACAGATTGGTATGGTGAT
TCGTACCATTACTTCTGAAATTCCAACTTTCCAAAAGCTCAAACTCCCTGAATCCTTAAAAAATGTGATTATGGAAAAGC
GGGGTTTGGTACTGGTGGTGGGTGGAACAGGATCAGGTAAATCAACCTCTTTGGCAGCCATGATTGACCATCGTAATGAA
AACTCAGCGGGGCATATCATTACTGTTGAAGATCCAGTGGAATACGTACACAAGCACAAAAAATCAATGATTACTCATCG
TGAAGTCGGTGTGGATTGTCATTCATGGCAGCATGCCTTGAAAAACACCTTACGTCAGGCACCAGATGTGATTCTGATCG
GAGAAATCCGCGATACAGAAACCATGGAACATGCGATTGCCTTTGCCGAAACAGGCCATTTGTGCCTAGGCACATTGCAT
GCCAACAATGCCAATCAAGCCTTAGATCGAATTATTAACTTCTTCCCAGAAGAACGTCGTAATCAGTTACTCATGGATCT
TTCATCCAATATGAAAGCAATTATTTCGCAACGTTTGGTACGCACCCAAGATGGTAAAGGGCGTCGTGCTGCGATTGAAA
TTTTGCTGAATACACCATTAATCGGAGACAATATCCTAAAAGGGCAGTTCCATGCACTGAAAGAGATTATGAGCAAATCG
CGCGAACTCGGTATGCAGACCTTCGATCAAGCCTTATTTGAGCTCTATAATGAAGGTGCAATTAATTACGATGAAGCTTT
ACGTAATGCTGATTCAGTCAATGAACTGCGTTTACAGATCAAGCTAAAAAGTACCCGTCAAGAAGGTTCACCTGTCGCCA
TGATGACCGCATTAAACGTGGTACAAGAGGAAAAGCCTGAAGAAGAGCAACAAACTGAAGATCAGTGA
ATGTATAACGCGGAATTATTAGAAGAAGCCAAAACCTTTATGTTTCATATGCTCACCAAGGTGGTGGAATATGGCGGTTC
AGATTTATTTATCACCGCAGATTTTCCACCGAGCATTAAACTACAAGGCTTAATGCGACCTTTAGGGCAACAAGCCTTAA
CAGCAGATAAAACCAAGTTGTTTGCCTATAGCCTCATGAATGAAAAACAACGCCAAGAGTTTGAAACTGAATGGGAATGT
AATTTTGCAATCAATGTTCCGAATGTTTCACGTTTTCGTGTCAATGTATTTAAACAACAGCTACAGATTGGTATGGTGAT
TCGTACCATTACTTCTGAAATTCCAACTTTCCAAAAGCTCAAACTCCCTGAATCCTTAAAAAATGTGATTATGGAAAAGC
GGGGTTTGGTACTGGTGGTGGGTGGAACAGGATCAGGTAAATCAACCTCTTTGGCAGCCATGATTGACCATCGTAATGAA
AACTCAGCGGGGCATATCATTACTGTTGAAGATCCAGTGGAATACGTACACAAGCACAAAAAATCAATGATTACTCATCG
TGAAGTCGGTGTGGATTGTCATTCATGGCAGCATGCCTTGAAAAACACCTTACGTCAGGCACCAGATGTGATTCTGATCG
GAGAAATCCGCGATACAGAAACCATGGAACATGCGATTGCCTTTGCCGAAACAGGCCATTTGTGCCTAGGCACATTGCAT
GCCAACAATGCCAATCAAGCCTTAGATCGAATTATTAACTTCTTCCCAGAAGAACGTCGTAATCAGTTACTCATGGATCT
TTCATCCAATATGAAAGCAATTATTTCGCAACGTTTGGTACGCACCCAAGATGGTAAAGGGCGTCGTGCTGCGATTGAAA
TTTTGCTGAATACACCATTAATCGGAGACAATATCCTAAAAGGGCAGTTCCATGCACTGAAAGAGATTATGAGCAAATCG
CGCGAACTCGGTATGCAGACCTTCGATCAAGCCTTATTTGAGCTCTATAATGAAGGTGCAATTAATTACGATGAAGCTTT
ACGTAATGCTGATTCAGTCAATGAACTGCGTTTACAGATCAAGCTAAAAAGTACCCGTCAAGAAGGTTCACCTGTCGCCA
TGATGACCGCATTAAACGTGGTACAAGAGGAAAAGCCTGAAGAAGAGCAACAAACTGAAGATCAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
60.632 |
88.101 |
0.534 |
| pilU | Acinetobacter baylyi ADP1 |
55.908 |
87.848 |
0.491 |
| pilU | Vibrio cholerae strain A1552 |
52.408 |
89.367 |
0.468 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.814 |
84.557 |
0.362 |