Detailed information NTG0373752

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FFH21_RS03700
• Genome accession: NZ_CP041754
• Coordinates: 776519..777856 (-)
• Length: 445 a.a.
• NCBI ID: WP_011167664.1
• Uniprot ID: Q48NJ1
• Organism: Pseudomonas sp. KBS0707
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 771519..782856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FFH21_RS03685 (FFH21_003685)	-	774380..775489 (-)	1110	WP_041924424.1	efflux RND transporter periplasmic adaptor subunit	-
FFH21_RS03690 (FFH21_003690)	-	775571..776188 (-)	618	WP_041924425.1	TetR/AcrR family transcriptional regulator	-
FFH21_RS03700 (FFH21_003700)	pilR	776519..777856 (-)	1338	WP_011167664.1	sigma-54 dependent transcriptional regulator	Regulator
FFH21_RS03705 (FFH21_003705)	pilS	777859..779451 (-)	1593	WP_011167665.1	nitrogen regulation protein NR(II)	Regulator
FFH21_RS03710 (FFH21_003710)	-	779441..779680 (-)	240	WP_002551997.1	PP0621 family protein	-
FFH21_RS03715 (FFH21_003715)	-	779810..780832 (-)	1023	WP_005733851.1	outer membrane protein assembly factor BamD	-
FFH21_RS03720 (FFH21_003720)	rluD	780982..781944 (+)	963	WP_002551999.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
FFH21_RS03725 (FFH21_003725)	pgeF	781941..782669 (+)	729	WP_011167666.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49798.88 Da
• Isoelectric Point: 6.6378

>NTDB_id=373752 FFH21_RS03700 WP_011167664.1 776519..777856(-) (pilR) [Pseudomonas sp. KBS0707]
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRCARNVAEAHDWLAREPFDMCLTDMRLPDGNGLELVQHIQHGYPHVPVA
MITAHGNLDTAINALKAGAFDFVTKPVDLGRLRELVNSALSLPCAQPARSIDSRLLGDSLAMRTLRNQIGKLARSQAPIY
ISGESGSGKELVARLIHEQGPRIDKPFIPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHTGTLFLDEVADLP
LAMQVKLLRAIQEKSIRSVGSQQEQIVDVRILCATHKNLNAEVAAGRFRQDLYYRLNVIEVRVPSLRERREDIDQLAASV
LKRLAGNGTQPVARLNAQALDTLKSYRFPGNVRELENMLERAYTLCENDEIHASDLRLAESASPQEHNGPSLADIDNLED
YLESIERKLILQALEETRWNRTAAAERLSLSFRSLRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=373752 FFH21_RS03700 WP_011167664.1 776519..777856(-) (pilR) [Pseudomonas sp. KBS0707]
ATGAGCCAACGGCAAAAAATCCTGATAGTCGATGACGAGCCGGATATCCGCGAACTGCTGGAGATCACTCTGGGGCGCAT
GAAACTCGACACCCGATGCGCCCGCAATGTTGCCGAGGCCCACGACTGGCTGGCCCGCGAGCCGTTCGATATGTGCCTGA
CCGACATGCGTCTGCCCGACGGCAACGGCCTTGAGCTGGTGCAGCATATTCAGCACGGCTACCCCCATGTGCCAGTGGCG
ATGATCACTGCCCACGGCAACCTGGACACCGCGATTAATGCGCTCAAGGCCGGGGCTTTCGATTTTGTGACCAAGCCGGT
TGACCTCGGCAGGCTGCGCGAACTGGTCAATAGTGCGCTGAGCCTGCCTTGCGCCCAGCCAGCCCGCAGCATCGACAGCC
GCCTGCTGGGCGACTCGCTGGCGATGCGTACCTTGCGCAACCAGATCGGCAAGCTGGCCCGCAGCCAGGCACCGATCTAC
ATCAGCGGCGAATCGGGCAGCGGCAAGGAGCTTGTAGCGCGGCTGATCCACGAGCAGGGTCCGCGCATCGATAAACCGTT
CATACCGGTGAATTGCGGGGCCATTCCTTCCGAGCTGATGGAGAGTGAATTCTTTGGCCATCGCAAGGGCAGTTTCAGCG
GTGCCCACGAAGACAAGCCCGGTCTGTTTCAGGCGGCACATACCGGGACGCTGTTTCTCGACGAGGTGGCCGACCTACCG
CTGGCCATGCAGGTAAAGCTGTTGCGAGCCATCCAGGAAAAATCAATCCGCAGTGTAGGCAGCCAGCAAGAACAGATTGT
GGACGTACGCATTCTGTGCGCCACGCACAAGAACCTTAATGCAGAGGTTGCGGCAGGCCGTTTCCGTCAGGATCTGTATT
ACCGGTTGAACGTGATCGAAGTGCGCGTCCCCTCATTGCGCGAACGGCGCGAGGACATCGATCAACTGGCAGCCAGTGTT
CTAAAGCGACTTGCTGGCAATGGCACGCAACCGGTGGCGCGCCTGAATGCGCAGGCGCTCGACACGCTGAAGAGCTACCG
ATTCCCCGGCAACGTGCGCGAACTGGAAAACATGCTGGAGCGCGCCTACACGCTCTGTGAAAACGATGAAATCCATGCCA
GCGACCTGCGCCTTGCAGAGTCCGCCAGCCCCCAGGAGCACAACGGTCCTAGCCTGGCCGACATCGACAACCTTGAAGAC
TACCTGGAAAGCATCGAGCGCAAGCTCATTCTGCAGGCCCTGGAAGAAACCCGCTGGAACCGTACCGCAGCGGCAGAAAG
GCTCAGCTTGTCCTTCAGATCGCTGCGTTACCGGCTGAAGAAACTGGGCCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: Q48NJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	77.703	99.775	0.775
pilR	Acinetobacter baumannii strain A118	48.491	100	0.506
luxO	Vibrio cholerae strain A1552	37.162	99.775	0.371