Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BMB171_RS05970 Genome accession   NC_014171
Coordinates   1166807..1166983 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis BMB171     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1161807..1171983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMB171_RS05950 (BMB171_C1029) clpC 1162138..1164738 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  BMB171_RS05955 (BMB171_C1030) - 1164777..1164959 (-) 183 WP_001211116.1 YjzD family protein -
  BMB171_RS05960 (BMB171_C1031) - 1165116..1165850 (+) 735 WP_000028712.1 hydrolase -
  BMB171_RS05965 (BMB171_C1032) - 1165880..1166752 (+) 873 WP_002164601.1 NAD(P)-dependent oxidoreductase -
  BMB171_RS05970 (BMB171_C1033) comZ 1166807..1166983 (+) 177 WP_001986215.1 ComZ family protein Regulator
  BMB171_RS05975 (BMB171_C1034) fabH 1167372..1168304 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  BMB171_RS05980 (BMB171_C1035) fabF 1168336..1169574 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  BMB171_RS05985 (BMB171_C1036) - 1169682..1170470 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  BMB171_RS05990 (BMB171_C1037) - 1170614..1171360 (+) 747 WP_000966127.1 YjbA family protein -
  BMB171_RS30750 - 1171383..1171598 (-) 216 WP_001233402.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=37292 BMB171_RS05970 WP_001986215.1 1166807..1166983(+) (comZ) [Bacillus thuringiensis BMB171]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=37292 BMB171_RS05970 WP_001986215.1 1166807..1166983(+) (comZ) [Bacillus thuringiensis BMB171]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment