Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FNL90_RS08130 | Genome accession | NZ_CP041408 |
| Coordinates | 1588274..1588765 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain 37-97S | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1583274..1593765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNL90_RS08115 (FNL90_08395) | - | 1586004..1586948 (+) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
| FNL90_RS08120 (FNL90_08400) | - | 1587081..1587737 (+) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| FNL90_RS08125 (FNL90_08405) | rpsR | 1587870..1588109 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| FNL90_RS08130 (FNL90_08410) | ssb | 1588274..1588765 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| FNL90_RS08135 (FNL90_08415) | rpsF | 1588787..1589077 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| FNL90_RS08140 (FNL90_08420) | - | 1589250..1589543 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| FNL90_RS08145 (FNL90_08425) | mutY | 1589711..1590865 (+) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| FNL90_RS08150 (FNL90_08430) | - | 1590941..1591534 (+) | 594 | WP_023079969.1 | helix-turn-helix domain-containing protein | - |
| FNL90_RS08155 (FNL90_08435) | trxA | 1591586..1591918 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| FNL90_RS08160 (FNL90_08440) | - | 1591981..1592481 (-) | 501 | WP_028797158.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=371902 FNL90_RS08130 WP_002983122.1 1588274..1588765(-) (ssb) [Streptococcus pyogenes strain 37-97S]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=371902 FNL90_RS08130 WP_002983122.1 1588274..1588765(-) (ssb) [Streptococcus pyogenes strain 37-97S]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |