Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FK538_RS12855 | Genome accession | NZ_CP041295 |
| Coordinates | 2673595..2674122 (-) | Length | 175 a.a. |
| NCBI ID | WP_034598246.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain 80-1-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2668595..2679122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK538_RS12835 (FK538_12835) | - | 2668863..2669699 (-) | 837 | WP_168370768.1 | hypothetical protein | - |
| FK538_RS12840 (FK538_12840) | aroB | 2669712..2670794 (-) | 1083 | WP_168370769.1 | 3-dehydroquinate synthase | - |
| FK538_RS12845 (FK538_12845) | aroK | 2670817..2671359 (-) | 543 | WP_016658449.1 | shikimate kinase AroK | - |
| FK538_RS12850 (FK538_12850) | pilQ | 2671396..2673534 (-) | 2139 | WP_171526199.1 | type IV pilus secretin PilQ | Machinery gene |
| FK538_RS12855 (FK538_12855) | pilP | 2673595..2674122 (-) | 528 | WP_034598246.1 | pilus assembly protein PilP | Machinery gene |
| FK538_RS12860 (FK538_12860) | pilO | 2674122..2674841 (-) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FK538_RS12865 (FK538_12865) | pilN | 2674838..2675473 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| FK538_RS12870 (FK538_12870) | pilM | 2675473..2676531 (-) | 1059 | WP_168370771.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19244.39 Da Isoelectric Point: 7.1666
>NTDB_id=371058 FK538_RS12855 WP_034598246.1 2673595..2674122(-) (pilP) [Acinetobacter indicus strain 80-1-2]
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQSPLPIEPAPTFEPAPVFNYAAHQLKSPFIPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRSEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQSPLPIEPAPTFEPAPVFNYAAHQLKSPFIPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRSEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=371058 FK538_RS12855 WP_034598246.1 2673595..2674122(-) (pilP) [Acinetobacter indicus strain 80-1-2]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGTCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCGCATCAGCTGAAAAGTCCGTTTATACCAAGTTCTCTGGCGGCCGAGCTGAAGATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTGAGCATGAAAGGCAGCATGCG
CGGGCAACGCAGCGAAATTCTGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATTAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGTCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCGCATCAGCTGAAAAGTCCGTTTATACCAAGTTCTCTGGCGGCCGAGCTGAAGATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTGAGCATGAAAGGCAGCATGCG
CGGGCAACGCAGCGAAATTCTGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATTAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
73.714 |
100 |
0.737 |
| comL | Acinetobacter baylyi ADP1 |
71.257 |
95.429 |
0.68 |