Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FK538_RS12865 | Genome accession | NZ_CP041295 |
| Coordinates | 2674838..2675473 (-) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain 80-1-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2669838..2680473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK538_RS12845 (FK538_12845) | aroK | 2670817..2671359 (-) | 543 | WP_016658449.1 | shikimate kinase AroK | - |
| FK538_RS12850 (FK538_12850) | pilQ | 2671396..2673534 (-) | 2139 | WP_171526199.1 | type IV pilus secretin PilQ | Machinery gene |
| FK538_RS12855 (FK538_12855) | pilP | 2673595..2674122 (-) | 528 | WP_034598246.1 | pilus assembly protein PilP | Machinery gene |
| FK538_RS12860 (FK538_12860) | pilO | 2674122..2674841 (-) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FK538_RS12865 (FK538_12865) | pilN | 2674838..2675473 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| FK538_RS12870 (FK538_12870) | pilM | 2675473..2676531 (-) | 1059 | WP_168370771.1 | pilus assembly protein PilM | Machinery gene |
| FK538_RS12875 (FK538_12875) | ponA | 2676703..2679282 (+) | 2580 | WP_168370772.1 | penicillin-binding protein PBP1a | - |
| FK538_RS12880 (FK538_12880) | - | 2679331..2680134 (-) | 804 | WP_168370773.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=371060 FK538_RS12865 WP_005180516.1 2674838..2675473(-) (pilN) [Acinetobacter indicus strain 80-1-2]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=371060 FK538_RS12865 WP_005180516.1 2674838..2675473(-) (pilN) [Acinetobacter indicus strain 80-1-2]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |