Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FK537_RS09340 | Genome accession | NZ_CP041291 |
| Coordinates | 1858630..1859157 (+) | Length | 175 a.a. |
| NCBI ID | WP_168370223.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain 94-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1853630..1864157
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK537_RS09325 (FK537_09395) | pilM | 1856221..1857279 (+) | 1059 | WP_005180518.1 | pilus assembly protein PilM | Machinery gene |
| FK537_RS09330 (FK537_09400) | pilN | 1857279..1857914 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| FK537_RS09335 (FK537_09405) | pilO | 1857911..1858630 (+) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FK537_RS09340 (FK537_09410) | pilP | 1858630..1859157 (+) | 528 | WP_168370223.1 | pilus assembly protein PilP | Machinery gene |
| FK537_RS09345 (FK537_09415) | pilQ | 1859218..1861356 (+) | 2139 | WP_168370224.1 | type IV pilus secretin PilQ | Machinery gene |
| FK537_RS09350 (FK537_09420) | aroK | 1861393..1861935 (+) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| FK537_RS09355 (FK537_09425) | aroB | 1861958..1863040 (+) | 1083 | WP_168369948.1 | 3-dehydroquinate synthase | - |
| FK537_RS09360 (FK537_09430) | - | 1863053..1863889 (+) | 837 | WP_104483915.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19262.42 Da Isoelectric Point: 7.1666
>NTDB_id=371008 FK537_RS09340 WP_168370223.1 1858630..1859157(+) (pilP) [Acinetobacter indicus strain 94-2]
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQSPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRSEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKFEKLSLVLVLGLLAAGCDSRIDAVNAQMAEIRNQSPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRSEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=371008 FK537_RS09340 WP_168370223.1 1858630..1859157(+) (pilP) [Acinetobacter indicus strain 94-2]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGTCGCCGTTGCCGATTGAGCCGGCACCAACTTTTGAGCCGGCACCTGTATTTA
ACTATGCCGCACATCAGTTGAAAAGTCCATTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCCGGCAAGCGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTGAGCATGAAAGGCAGCATGCG
CGGGCAACGCAGCGAAATTCTGGCCCTGATTCAAACGCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TGCACAAATGGCAGAAATCCGTAATCAGTCGCCGTTGCCGATTGAGCCGGCACCAACTTTTGAGCCGGCACCTGTATTTA
ACTATGCCGCACATCAGTTGAAAAGTCCATTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCCGGCAAGCGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTGAGCATGAAAGGCAGCATGCG
CGGGCAACGCAGCGAAATTCTGGCCCTGATTCAAACGCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
74.286 |
100 |
0.743 |
| comL | Acinetobacter baylyi ADP1 |
71.257 |
95.429 |
0.68 |