Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FKV23_RS04225 | Genome accession | NZ_CP041242 |
| Coordinates | 981706..982203 (+) | Length | 165 a.a. |
| NCBI ID | WP_141622735.1 | Uniprot ID | A0A514BPT2 |
| Organism | Marilutibacter alkalisoli strain SJ-36 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 976706..987203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FKV23_RS04205 (FKV23_04205) | murL | 976760..978160 (+) | 1401 | WP_141622731.1 | UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L- glutamate epimerase | - |
| FKV23_RS04210 (FKV23_04210) | murD | 978102..979580 (+) | 1479 | WP_141622732.1 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase | - |
| FKV23_RS04215 (FKV23_04215) | - | 979660..980460 (+) | 801 | WP_141622733.1 | dienelactone hydrolase family protein | - |
| FKV23_RS04220 (FKV23_04220) | - | 980467..981474 (-) | 1008 | WP_141622734.1 | polyprenyl synthetase family protein | - |
| FKV23_RS04225 (FKV23_04225) | ssb | 981706..982203 (+) | 498 | WP_141622735.1 | single-stranded DNA-binding protein | Machinery gene |
| FKV23_RS04230 (FKV23_04230) | rfbB | 982258..983310 (+) | 1053 | WP_141622736.1 | dTDP-glucose 4,6-dehydratase | - |
| FKV23_RS04235 (FKV23_04235) | rfbA | 983320..984204 (+) | 885 | WP_141622737.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| FKV23_RS04240 (FKV23_04240) | rfbC | 984201..984758 (+) | 558 | WP_141622738.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| FKV23_RS04245 (FKV23_04245) | rfbD | 984769..985656 (+) | 888 | WP_141622739.1 | dTDP-4-dehydrorhamnose reductase | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18165.00 Da Isoelectric Point: 5.3670
>NTDB_id=370767 FKV23_RS04225 WP_141622735.1 981706..982203(+) (ssb) [Marilutibacter alkalisoli strain SJ-36]
MARGINKVILVGNLGNDPDTKYTQGGMAVTRISLATTSVRKDREGNTQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
SIRYDKYTGQDGVEKYSTDIIADEMQMLGGRGEGGGGSRGEYRGGGDRPQQQRAPARQDAQPRREAPPAKSNDFADDFAD
DDIPF
MARGINKVILVGNLGNDPDTKYTQGGMAVTRISLATTSVRKDREGNTQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
SIRYDKYTGQDGVEKYSTDIIADEMQMLGGRGEGGGGSRGEYRGGGDRPQQQRAPARQDAQPRREAPPAKSNDFADDFAD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=370767 FKV23_RS04225 WP_141622735.1 981706..982203(+) (ssb) [Marilutibacter alkalisoli strain SJ-36]
ATGGCTCGTGGCATCAACAAGGTGATCCTGGTCGGCAACCTCGGCAACGATCCCGACACCAAATACACCCAGGGCGGCAT
GGCCGTGACCCGGATCAGCCTGGCGACCACCAGCGTACGCAAGGACCGCGAGGGCAACACCCAGGAGCGCACCGAATGGC
ACCGGGTGGTGTTCTTCGGCAAGCTCGGCGAGATCGCCGGCGAATACCTGCGCAAGGGCAGCCAGGTCTATGTGGAAGGC
TCGATCCGTTACGACAAGTACACCGGCCAGGACGGGGTGGAGAAGTACTCCACCGACATCATTGCCGACGAGATGCAGAT
GCTCGGTGGCCGCGGCGAAGGCGGCGGTGGCAGCCGCGGCGAGTACCGTGGTGGTGGTGACCGACCGCAGCAGCAGCGCG
CACCGGCACGGCAGGACGCCCAGCCCCGGCGTGAGGCACCGCCGGCCAAGTCGAACGACTTCGCCGATGATTTCGCGGAT
GATGACATCCCCTTCTGA
ATGGCTCGTGGCATCAACAAGGTGATCCTGGTCGGCAACCTCGGCAACGATCCCGACACCAAATACACCCAGGGCGGCAT
GGCCGTGACCCGGATCAGCCTGGCGACCACCAGCGTACGCAAGGACCGCGAGGGCAACACCCAGGAGCGCACCGAATGGC
ACCGGGTGGTGTTCTTCGGCAAGCTCGGCGAGATCGCCGGCGAATACCTGCGCAAGGGCAGCCAGGTCTATGTGGAAGGC
TCGATCCGTTACGACAAGTACACCGGCCAGGACGGGGTGGAGAAGTACTCCACCGACATCATTGCCGACGAGATGCAGAT
GCTCGGTGGCCGCGGCGAAGGCGGCGGTGGCAGCCGCGGCGAGTACCGTGGTGGTGGTGACCGACCGCAGCAGCAGCGCG
CACCGGCACGGCAGGACGCCCAGCCCCGGCGTGAGGCACCGCCGGCCAAGTCGAACGACTTCGCCGATGATTTCGCGGAT
GATGACATCCCCTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
45.556 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
46.286 |
100 |
0.491 |
| ssb | Neisseria meningitidis MC58 |
44.828 |
100 |
0.473 |
| ssb | Glaesserella parasuis strain SC1401 |
42.135 |
100 |
0.455 |