Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FJN14_RS00850 | Genome accession | NZ_CP041170 |
| Coordinates | 190074..190664 (+) | Length | 196 a.a. |
| NCBI ID | WP_012516753.1 | Uniprot ID | F2G3Q0 |
| Organism | Alteromonas mediterranea strain PT15 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 185074..195664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FJN14_RS00835 (FJN14_00835) | - | 185692..186747 (+) | 1056 | WP_071958341.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| FJN14_RS00840 (FJN14_00840) | galK | 186740..187879 (+) | 1140 | WP_141153221.1 | galactokinase | - |
| FJN14_RS00845 (FJN14_00845) | - | 188247..189809 (+) | 1563 | WP_015065962.1 | sodium/sugar symporter | - |
| FJN14_RS00850 (FJN14_00850) | ssb | 190074..190664 (+) | 591 | WP_012516753.1 | single-stranded DNA-binding protein | Machinery gene |
| FJN14_RS00855 (FJN14_00855) | - | 190874..191824 (+) | 951 | WP_141153222.1 | hypothetical protein | - |
| FJN14_RS00860 (FJN14_00860) | - | 192086..193372 (+) | 1287 | WP_181406790.1 | alpha/beta hydrolase family protein | - |
| FJN14_RS00865 (FJN14_00865) | - | 193491..195620 (-) | 2130 | WP_141153224.1 | alpha-galactosidase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21299.23 Da Isoelectric Point: 4.9562
>NTDB_id=370090 FJN14_RS00850 WP_012516753.1 190074..190664(+) (ssb) [Alteromonas mediterranea strain PT15]
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDKYTTEIIVDQMQMLGGRGGDGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNQSQ
GQGGGYNQAPQGGNPSQPKTPPMAEPDFDFDDDIPF
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDKYTTEIIVDQMQMLGGRGGDGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNQSQ
GQGGGYNQAPQGGNPSQPKTPPMAEPDFDFDDDIPF
Nucleotide
Download Length: 591 bp
>NTDB_id=370090 FJN14_RS00850 WP_012516753.1 190074..190664(+) (ssb) [Alteromonas mediterranea strain PT15]
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTACGTAGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAGCAAGGTCAGGATAAGTACACTACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGCGGTCGCGGCGGTGATGGTGGCGGCGGAAACGGCGGTTACCAGCGTCCTCAAAACAACCAAGGCGGTTATA
ATCAAGCGCCAGCGCAAGGTGGTTACAACCAGGCTCCACAACAAGGTGGAGGCCAGCAAGGCGGCTATAACCAGAGCCAG
GGCCAAGGCGGTGGTTATAATCAAGCGCCGCAAGGTGGTAACCCGTCACAGCCTAAGACTCCGCCTATGGCTGAACCAGA
CTTCGATTTTGACGACGATATTCCGTTCTAA
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTACGTAGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAGCAAGGTCAGGATAAGTACACTACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGCGGTCGCGGCGGTGATGGTGGCGGCGGAAACGGCGGTTACCAGCGTCCTCAAAACAACCAAGGCGGTTATA
ATCAAGCGCCAGCGCAAGGTGGTTACAACCAGGCTCCACAACAAGGTGGAGGCCAGCAAGGCGGCTATAACCAGAGCCAG
GGCCAAGGCGGTGGTTATAATCAAGCGCCGCAAGGTGGTAACCCGTCACAGCCTAAGACTCCGCCTATGGCTGAACCAGA
CTTCGATTTTGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
56 |
100 |
0.571 |
| ssb | Vibrio cholerae strain A1552 |
53.731 |
100 |
0.551 |
| ssb | Neisseria meningitidis MC58 |
46.392 |
98.98 |
0.459 |
| ssb | Neisseria gonorrhoeae MS11 |
46.392 |
98.98 |
0.459 |