Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | FIV34_RS17185 | Genome accession | NZ_CP041046 |
| Coordinates | 3762099..3763514 (+) | Length | 471 a.a. |
| NCBI ID | WP_139984744.1 | Uniprot ID | A0A4Y5Z8F2 |
| Organism | Luteibacter pinisoli strain MAH-14 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3757099..3768514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIV34_RS17170 (FIV34_17170) | sucD | 3758132..3759004 (-) | 873 | WP_139984742.1 | succinate--CoA ligase subunit alpha | - |
| FIV34_RS17175 (FIV34_17175) | sucC | 3759018..3760178 (-) | 1161 | WP_139984743.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| FIV34_RS17180 (FIV34_17180) | - | 3760409..3762031 (+) | 1623 | WP_139986050.1 | ATP-binding protein | - |
| FIV34_RS17185 (FIV34_17185) | pilR | 3762099..3763514 (+) | 1416 | WP_139984744.1 | sigma-54 dependent transcriptional regulator | Regulator |
| FIV34_RS17190 (FIV34_17190) | - | 3763491..3763886 (-) | 396 | WP_139984745.1 | hypothetical protein | - |
| FIV34_RS17195 (FIV34_17195) | - | 3763992..3765560 (-) | 1569 | WP_139984746.1 | response regulator | - |
| FIV34_RS17200 (FIV34_17200) | - | 3765583..3766029 (-) | 447 | WP_139984747.1 | response regulator | - |
| FIV34_RS17205 (FIV34_17205) | - | 3766026..3767825 (-) | 1800 | WP_139984748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 471 a.a. Molecular weight: 51227.77 Da Isoelectric Point: 5.9906
>NTDB_id=369170 FIV34_RS17185 WP_139984744.1 3762099..3763514(+) (pilR) [Luteibacter pinisoli strain MAH-14]
MSKQTVLVIDDERDIRELLTITLGRMELDVDAVGSVSEARNALANRRYDLCFTDMRLPDGSGQEIIELISATYPDMPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIHLLRRLVKTALRLSEERRAESGNKAAPGADRLIGESPVMVEVRSKIAKLARN
QAPVYIGGESGVGKELVARLIHELGPRASGTFVPVNCGAIPSELMESEFFGHRKGSFTGAHADKEGLFQAAHGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGGRDEVPVDVRILSATHKNLAALVEQGQFRQDLFYRINVIELRVPPLRERRGDVPR
LADFILRQLAVESGGAPGTLKPDALAALEAYQFPGNVRELENILERAMAMCEGDTIEADDLMLPQRTSLPTDASPATAGG
MPVPNAATPAGPPAPRNPASDGSLEDYITNIERDTIIKALEESRYNKTATAKKLGITFRALRYKLKKLGID
MSKQTVLVIDDERDIRELLTITLGRMELDVDAVGSVSEARNALANRRYDLCFTDMRLPDGSGQEIIELISATYPDMPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIHLLRRLVKTALRLSEERRAESGNKAAPGADRLIGESPVMVEVRSKIAKLARN
QAPVYIGGESGVGKELVARLIHELGPRASGTFVPVNCGAIPSELMESEFFGHRKGSFTGAHADKEGLFQAAHGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGGRDEVPVDVRILSATHKNLAALVEQGQFRQDLFYRINVIELRVPPLRERRGDVPR
LADFILRQLAVESGGAPGTLKPDALAALEAYQFPGNVRELENILERAMAMCEGDTIEADDLMLPQRTSLPTDASPATAGG
MPVPNAATPAGPPAPRNPASDGSLEDYITNIERDTIIKALEESRYNKTATAKKLGITFRALRYKLKKLGID
Nucleotide
Download Length: 1416 bp
>NTDB_id=369170 FIV34_RS17185 WP_139984744.1 3762099..3763514(+) (pilR) [Luteibacter pinisoli strain MAH-14]
ATGAGCAAGCAGACTGTCCTGGTCATCGACGACGAGCGGGACATCCGCGAGTTGTTGACCATCACTCTCGGTCGAATGGA
ACTCGACGTCGACGCCGTGGGGAGCGTCAGCGAGGCGCGGAACGCCCTGGCCAACCGCCGCTATGACCTGTGCTTCACCG
ACATGCGGCTGCCTGACGGCAGTGGCCAGGAGATCATTGAGCTGATCTCGGCCACCTACCCCGACATGCCGGTGGCCATG
ATTACCGCCTACGGCAACGTGGACGCGGCCGTGAACGCCCTAAAAGCGGGCGCGTTCGACTTCGTCTCCAAGCCGGTGGA
CATCCACCTGCTGCGCCGCCTGGTGAAGACCGCGCTGCGCCTTTCCGAAGAGCGCCGTGCCGAATCCGGCAACAAGGCCG
CCCCCGGCGCGGATCGCCTGATTGGCGAATCGCCGGTGATGGTCGAAGTGCGCAGCAAGATTGCCAAGCTCGCCCGCAAC
CAGGCACCCGTCTATATCGGCGGCGAATCCGGCGTGGGCAAGGAACTGGTCGCCCGGCTCATCCACGAACTGGGGCCGCG
CGCCTCGGGTACCTTCGTGCCGGTGAACTGCGGCGCCATTCCGTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCACCGGTGCGCATGCCGACAAGGAAGGCCTGTTCCAGGCCGCCCACGGCGGCACCCTGTTCCTCGATGAA
GTGGCCGAGCTGCCCCTGCACATGCAGGTGAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGCCCGATCGGCGGCCG
CGATGAAGTGCCGGTGGACGTGCGCATCCTCTCGGCCACGCACAAGAACCTCGCGGCGCTCGTCGAGCAGGGCCAGTTCC
GCCAGGATCTGTTCTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGCCGTGGCGACGTGCCGCGC
CTCGCGGACTTCATCCTGCGCCAGCTCGCCGTGGAATCCGGCGGCGCACCGGGCACGCTGAAGCCCGATGCCCTCGCCGC
CCTCGAGGCCTACCAGTTCCCGGGCAACGTCCGCGAGCTGGAGAACATCCTCGAACGCGCGATGGCCATGTGCGAAGGCG
ACACCATCGAAGCCGACGACCTGATGCTGCCGCAGCGCACGTCGCTGCCGACCGACGCCAGCCCGGCGACTGCCGGCGGC
ATGCCGGTGCCGAACGCGGCAACCCCTGCCGGCCCGCCCGCGCCACGCAACCCGGCATCGGACGGCTCGCTCGAGGACTA
CATCACCAACATCGAGCGCGACACCATCATCAAGGCCCTGGAAGAGTCCCGCTACAACAAGACCGCCACCGCCAAGAAGC
TGGGCATCACCTTCCGTGCGCTTCGCTACAAGCTAAAGAAGCTCGGCATCGACTGA
ATGAGCAAGCAGACTGTCCTGGTCATCGACGACGAGCGGGACATCCGCGAGTTGTTGACCATCACTCTCGGTCGAATGGA
ACTCGACGTCGACGCCGTGGGGAGCGTCAGCGAGGCGCGGAACGCCCTGGCCAACCGCCGCTATGACCTGTGCTTCACCG
ACATGCGGCTGCCTGACGGCAGTGGCCAGGAGATCATTGAGCTGATCTCGGCCACCTACCCCGACATGCCGGTGGCCATG
ATTACCGCCTACGGCAACGTGGACGCGGCCGTGAACGCCCTAAAAGCGGGCGCGTTCGACTTCGTCTCCAAGCCGGTGGA
CATCCACCTGCTGCGCCGCCTGGTGAAGACCGCGCTGCGCCTTTCCGAAGAGCGCCGTGCCGAATCCGGCAACAAGGCCG
CCCCCGGCGCGGATCGCCTGATTGGCGAATCGCCGGTGATGGTCGAAGTGCGCAGCAAGATTGCCAAGCTCGCCCGCAAC
CAGGCACCCGTCTATATCGGCGGCGAATCCGGCGTGGGCAAGGAACTGGTCGCCCGGCTCATCCACGAACTGGGGCCGCG
CGCCTCGGGTACCTTCGTGCCGGTGAACTGCGGCGCCATTCCGTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCACCGGTGCGCATGCCGACAAGGAAGGCCTGTTCCAGGCCGCCCACGGCGGCACCCTGTTCCTCGATGAA
GTGGCCGAGCTGCCCCTGCACATGCAGGTGAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGCCCGATCGGCGGCCG
CGATGAAGTGCCGGTGGACGTGCGCATCCTCTCGGCCACGCACAAGAACCTCGCGGCGCTCGTCGAGCAGGGCCAGTTCC
GCCAGGATCTGTTCTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGCCGTGGCGACGTGCCGCGC
CTCGCGGACTTCATCCTGCGCCAGCTCGCCGTGGAATCCGGCGGCGCACCGGGCACGCTGAAGCCCGATGCCCTCGCCGC
CCTCGAGGCCTACCAGTTCCCGGGCAACGTCCGCGAGCTGGAGAACATCCTCGAACGCGCGATGGCCATGTGCGAAGGCG
ACACCATCGAAGCCGACGACCTGATGCTGCCGCAGCGCACGTCGCTGCCGACCGACGCCAGCCCGGCGACTGCCGGCGGC
ATGCCGGTGCCGAACGCGGCAACCCCTGCCGGCCCGCCCGCGCCACGCAACCCGGCATCGGACGGCTCGCTCGAGGACTA
CATCACCAACATCGAGCGCGACACCATCATCAAGGCCCTGGAAGAGTCCCGCTACAACAAGACCGCCACCGCCAAGAAGC
TGGGCATCACCTTCCGTGCGCTTCGCTACAAGCTAAAGAAGCTCGGCATCGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
61.571 |
100 |
0.616 |
| pilR | Acinetobacter baumannii strain A118 |
48.394 |
99.151 |
0.48 |