Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FIU11_RS04425 | Genome accession | NZ_CP040990 |
| Coordinates | 829831..830481 (-) | Length | 216 a.a. |
| NCBI ID | WP_004724086.1 | Uniprot ID | - |
| Organism | Vibrio furnissii strain FDAARGOS_777 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 824831..835481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU11_RS04415 (FIU11_04415) | uvrA | 825873..828695 (-) | 2823 | WP_004724090.1 | excinuclease ABC subunit UvrA | - |
| FIU11_RS04420 (FIU11_04420) | galU | 828833..829702 (-) | 870 | WP_004724089.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FIU11_RS04425 (FIU11_04425) | qstR | 829831..830481 (-) | 651 | WP_004724086.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| FIU11_RS04430 (FIU11_04430) | ssb | 830764..831297 (+) | 534 | WP_004724084.1 | single-stranded DNA-binding protein | Machinery gene |
| FIU11_RS04435 (FIU11_04435) | csrD | 831433..833427 (+) | 1995 | WP_050780245.1 | RNase E specificity factor CsrD | - |
| FIU11_RS04440 (FIU11_04440) | - | 833435..834880 (+) | 1446 | WP_038150620.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 24806.51 Da Isoelectric Point: 8.7565
>NTDB_id=368522 FIU11_RS04425 WP_004724086.1 829831..830481(-) (qstR) [Vibrio furnissii strain FDAARGOS_777]
MQRANYARTIYYLCLDATLPPPPPLGDALTRLALPVPQIEPEQLLQAYQADKHKILLFNYGEHDAIRQRLGPLPITSPHL
ETILFGVEKRLRTEELLTFGNLKGLFYQDDAPSSIAQGLAEIINGQNWLPRHVSSQLLHYYRHIFQHHHTQATIELTTRE
LQILRSLQTGASNMQMAENLFISEFTVKSHLYQIFKKLSVKNRTQAITWANQNLLS
MQRANYARTIYYLCLDATLPPPPPLGDALTRLALPVPQIEPEQLLQAYQADKHKILLFNYGEHDAIRQRLGPLPITSPHL
ETILFGVEKRLRTEELLTFGNLKGLFYQDDAPSSIAQGLAEIINGQNWLPRHVSSQLLHYYRHIFQHHHTQATIELTTRE
LQILRSLQTGASNMQMAENLFISEFTVKSHLYQIFKKLSVKNRTQAITWANQNLLS
Nucleotide
Download Length: 651 bp
>NTDB_id=368522 FIU11_RS04425 WP_004724086.1 829831..830481(-) (qstR) [Vibrio furnissii strain FDAARGOS_777]
ATGCAACGCGCCAATTACGCCCGAACGATTTACTATTTGTGTCTGGATGCCACCCTCCCTCCGCCACCCCCATTGGGTGA
CGCACTCACACGACTCGCCCTGCCTGTGCCACAGATTGAACCCGAACAACTGTTGCAAGCGTATCAGGCCGACAAACATA
AAATCCTACTGTTTAATTATGGTGAACATGACGCGATTCGCCAGCGTTTAGGCCCCTTGCCCATCACCAGCCCCCACTTG
GAAACCATTTTATTTGGTGTAGAAAAACGCCTGCGCACGGAAGAACTTCTCACCTTTGGCAACCTGAAAGGCTTGTTTTA
TCAAGATGACGCGCCCTCATCGATCGCGCAGGGATTGGCGGAAATCATCAACGGTCAGAATTGGCTGCCACGCCATGTCA
GCAGTCAGTTATTGCATTACTATCGCCACATTTTCCAGCATCATCACACGCAAGCAACCATCGAGCTCACCACACGTGAA
TTACAAATCCTACGCAGCTTGCAGACGGGTGCCTCAAACATGCAGATGGCGGAAAACCTGTTCATCAGTGAATTTACCGT
CAAGTCGCACCTCTATCAGATCTTTAAAAAGCTCTCGGTCAAGAACCGAACTCAAGCCATCACATGGGCCAACCAAAACC
TGCTCTCATAA
ATGCAACGCGCCAATTACGCCCGAACGATTTACTATTTGTGTCTGGATGCCACCCTCCCTCCGCCACCCCCATTGGGTGA
CGCACTCACACGACTCGCCCTGCCTGTGCCACAGATTGAACCCGAACAACTGTTGCAAGCGTATCAGGCCGACAAACATA
AAATCCTACTGTTTAATTATGGTGAACATGACGCGATTCGCCAGCGTTTAGGCCCCTTGCCCATCACCAGCCCCCACTTG
GAAACCATTTTATTTGGTGTAGAAAAACGCCTGCGCACGGAAGAACTTCTCACCTTTGGCAACCTGAAAGGCTTGTTTTA
TCAAGATGACGCGCCCTCATCGATCGCGCAGGGATTGGCGGAAATCATCAACGGTCAGAATTGGCTGCCACGCCATGTCA
GCAGTCAGTTATTGCATTACTATCGCCACATTTTCCAGCATCATCACACGCAAGCAACCATCGAGCTCACCACACGTGAA
TTACAAATCCTACGCAGCTTGCAGACGGGTGCCTCAAACATGCAGATGGCGGAAAACCTGTTCATCAGTGAATTTACCGT
CAAGTCGCACCTCTATCAGATCTTTAAAAAGCTCTCGGTCAAGAACCGAACTCAAGCCATCACATGGGCCAACCAAAACC
TGCTCTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
71.429 |
100 |
0.718 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
50.224 |
100 |
0.519 |
| qstR | Vibrio campbellii strain DS40M4 |
51.389 |
100 |
0.514 |