Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | FIU11_RS01275 | Genome accession | NZ_CP040990 |
| Coordinates | 162626..163216 (-) | Length | 196 a.a. |
| NCBI ID | WP_004728566.1 | Uniprot ID | - |
| Organism | Vibrio furnissii strain FDAARGOS_777 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 157626..168216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU11_RS01255 (FIU11_01255) | aroB | 158556..159641 (-) | 1086 | WP_004728570.1 | 3-dehydroquinate synthase | - |
| FIU11_RS01260 (FIU11_01260) | aroK | 159669..160187 (-) | 519 | WP_004728569.1 | shikimate kinase AroK | - |
| FIU11_RS01265 (FIU11_01265) | pilQ | 160375..162099 (-) | 1725 | WP_004728568.1 | type IV pilus secretin PilQ | Machinery gene |
| FIU11_RS01270 (FIU11_01270) | pilP | 162124..162636 (-) | 513 | WP_004728567.1 | pilus assembly protein PilP | Machinery gene |
| FIU11_RS01275 (FIU11_01275) | pilO | 162626..163216 (-) | 591 | WP_004728566.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FIU11_RS01280 (FIU11_01280) | pilN | 163209..163799 (-) | 591 | WP_004728565.1 | PilN domain-containing protein | Machinery gene |
| FIU11_RS01285 (FIU11_01285) | pilM | 163789..164793 (-) | 1005 | WP_004728564.1 | type IV pilus assembly protein PilM | Machinery gene |
| FIU11_RS01290 (FIU11_01290) | - | 164938..167418 (+) | 2481 | WP_038152617.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22742.98 Da Isoelectric Point: 4.8892
>NTDB_id=368511 FIU11_RS01275 WP_004728566.1 162626..163216(-) (pilO) [Vibrio furnissii strain FDAARGOS_777]
MANVYDLELDEISEWPLVAQLVALVLLVLVLQGAGYWFYLQPKQDTLAAHKQQEQTLKSTIRIKASKVATLPKLKIQLDE
LAQRYDFLLRQLPVQKELASMLASVNELGLDNSLTFTRIDWGEKQNQQFLYRLPLNIELTGNYHDIGDFSEAIARLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKPEVSDEQ
MANVYDLELDEISEWPLVAQLVALVLLVLVLQGAGYWFYLQPKQDTLAAHKQQEQTLKSTIRIKASKVATLPKLKIQLDE
LAQRYDFLLRQLPVQKELASMLASVNELGLDNSLTFTRIDWGEKQNQQFLYRLPLNIELTGNYHDIGDFSEAIARLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKPEVSDEQ
Nucleotide
Download Length: 591 bp
>NTDB_id=368511 FIU11_RS01275 WP_004728566.1 162626..163216(-) (pilO) [Vibrio furnissii strain FDAARGOS_777]
ATGGCTAACGTATACGATCTGGAACTGGACGAAATCAGCGAATGGCCGTTGGTGGCTCAATTGGTTGCCTTGGTGCTGCT
GGTGTTGGTGTTGCAGGGCGCGGGATACTGGTTTTATTTGCAGCCTAAACAAGACACATTGGCCGCACACAAGCAGCAAG
AGCAAACGCTGAAGTCGACGATTCGCATCAAAGCCAGCAAAGTCGCGACATTGCCGAAGCTCAAGATTCAGCTGGATGAA
CTGGCACAGCGGTACGACTTCCTGTTGCGTCAGCTGCCGGTGCAAAAAGAGCTCGCCAGCATGTTGGCGTCGGTGAACGA
GTTGGGGCTCGACAACAGTCTGACCTTTACTCGCATCGACTGGGGAGAAAAGCAAAATCAACAATTTCTCTATCGGCTGC
CGCTCAATATCGAATTGACCGGTAATTATCACGACATCGGCGATTTTTCTGAAGCGATCGCGCGTCTACCACGCATCATT
AATTTTGACGACGTTGACTGGCAGCGCGTCAGCCAAGAGAGCAGCACGCTCCATTTCCGCGTTCGCGCCTATACCTATCA
GTTCAAACCGGAGGTCAGTGATGAACAGTAA
ATGGCTAACGTATACGATCTGGAACTGGACGAAATCAGCGAATGGCCGTTGGTGGCTCAATTGGTTGCCTTGGTGCTGCT
GGTGTTGGTGTTGCAGGGCGCGGGATACTGGTTTTATTTGCAGCCTAAACAAGACACATTGGCCGCACACAAGCAGCAAG
AGCAAACGCTGAAGTCGACGATTCGCATCAAAGCCAGCAAAGTCGCGACATTGCCGAAGCTCAAGATTCAGCTGGATGAA
CTGGCACAGCGGTACGACTTCCTGTTGCGTCAGCTGCCGGTGCAAAAAGAGCTCGCCAGCATGTTGGCGTCGGTGAACGA
GTTGGGGCTCGACAACAGTCTGACCTTTACTCGCATCGACTGGGGAGAAAAGCAAAATCAACAATTTCTCTATCGGCTGC
CGCTCAATATCGAATTGACCGGTAATTATCACGACATCGGCGATTTTTCTGAAGCGATCGCGCGTCTACCACGCATCATT
AATTTTGACGACGTTGACTGGCAGCGCGTCAGCCAAGAGAGCAGCACGCTCCATTTCCGCGTTCGCGCCTATACCTATCA
GTTCAAACCGGAGGTCAGTGATGAACAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
78.061 |
100 |
0.781 |
| pilO | Vibrio campbellii strain DS40M4 |
70.526 |
96.939 |
0.684 |