Detailed information NTG0368513

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FIU11_RS01285
• Genome accession: NZ_CP040990
• Coordinates: 163789..164793 (-)
• Length: 334 a.a.
• NCBI ID: WP_004728564.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain FDAARGOS_777
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 158789..169793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU11_RS01260 (FIU11_01260)	aroK	159669..160187 (-)	519	WP_004728569.1	shikimate kinase AroK	-
FIU11_RS01265 (FIU11_01265)	pilQ	160375..162099 (-)	1725	WP_004728568.1	type IV pilus secretin PilQ	Machinery gene
FIU11_RS01270 (FIU11_01270)	pilP	162124..162636 (-)	513	WP_004728567.1	pilus assembly protein PilP	Machinery gene
FIU11_RS01275 (FIU11_01275)	pilO	162626..163216 (-)	591	WP_004728566.1	type 4a pilus biogenesis protein PilO	Machinery gene
FIU11_RS01280 (FIU11_01280)	pilN	163209..163799 (-)	591	WP_004728565.1	PilN domain-containing protein	Machinery gene
FIU11_RS01285 (FIU11_01285)	pilM	163789..164793 (-)	1005	WP_004728564.1	type IV pilus assembly protein PilM	Machinery gene
FIU11_RS01290 (FIU11_01290)	-	164938..167418 (+)	2481	WP_038152617.1	penicillin-binding protein 1A	-
FIU11_RS01295 (FIU11_01295)	oxyR	167504..168400 (-)	897	WP_004728562.1	DNA-binding transcriptional regulator OxyR	-
FIU11_RS01300 (FIU11_01300)	-	168544..169278 (+)	735	WP_004728561.1	glutathione peroxidase	-
FIU11_RS01305 (FIU11_01305)	-	169402..169665 (+)	264	WP_004728560.1	DUF3624 domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36877.16 Da
• Isoelectric Point: 6.6617

>NTDB_id=368513 FIU11_RS01285 WP_004728564.1 163789..164793(-) (pilM) [Vibrio furnissii strain FDAARGOS_777]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSDDIFADNHTLDYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSDLDASEQEFAVYQAFSHQSPFPIDDLSLDFVPSGDNPAGRSTNTLYQVYATRREVVDNRLSVASKAGFEP
LLLDVQVHGLLQIWQWVSRAQQRDDWMLVDVGLTQTTLCMDFADKAPFYKDIPLGTRQWHADPTPHPVPLSEPPMAGVNE
LVERIARQVQLLLSLQGHQALGGIWLSGGGATTEGLSAALAARLNLPCELFHPLTGFVTRRRMRARVPDDLQRFSTAAGL
ALRGLNWLERDHGA

Nucleotide

• Length: 1005 bp

>NTDB_id=368513 FIU11_RS01285 WP_004728564.1 163789..164793(-) (pilM) [Vibrio furnissii strain FDAARGOS_777]
ATGGGTAAATCATTAGTTACAGGTGTCGATATCGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAGGGCGAATC
GTATTCGCTGGTCGGCTACCAAGAAATAGTCGTATCCGACGATATTTTCGCTGATAACCACACGCTGGATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTACCGTTATTTAGTCGCAAAGTTGCGCTGGCTGTGCCGGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGATTTGGATGCCAGCGAACAAGAATTTGCTGTCTATCAGGCGTTTTCCCA
TCAATCGCCGTTTCCCATCGATGATCTGAGTTTGGATTTCGTACCAAGCGGCGATAACCCCGCCGGGCGCAGCACCAATA
CCCTGTATCAAGTGTACGCCACGCGACGCGAAGTGGTCGATAACCGGTTATCGGTGGCGAGCAAAGCGGGCTTTGAGCCG
CTGCTGCTCGATGTGCAGGTGCATGGGTTGCTCCAGATTTGGCAATGGGTGAGTCGCGCGCAGCAGCGCGACGATTGGAT
GCTGGTGGACGTCGGGTTGACGCAAACCACGTTATGCATGGATTTCGCCGATAAAGCGCCCTTCTATAAAGACATTCCGC
TGGGAACGCGTCAATGGCATGCCGACCCCACGCCCCATCCTGTGCCGCTGAGCGAGCCTCCGATGGCTGGAGTCAACGAG
CTGGTTGAGCGAATTGCGCGCCAAGTGCAACTGCTGTTGTCCTTGCAGGGCCATCAAGCGCTGGGCGGAATTTGGCTGTC
GGGTGGTGGGGCGACAACGGAAGGCCTCAGCGCGGCTTTGGCTGCGCGACTGAATCTGCCGTGTGAACTGTTTCATCCGC
TGACGGGATTTGTGACGCGCCGCCGCATGCGAGCGCGTGTACCAGACGATCTGCAACGTTTTAGTACGGCGGCTGGCTTG
GCGCTGCGCGGACTCAACTGGTTGGAGCGTGATCATGGTGCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-324)

• Type IV pilus assembly protein PilM; (PilM_2) (8-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	64.307	100	0.653
pilM	Vibrio campbellii strain DS40M4	45.266	100	0.458