Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FDP16_RS09120 | Genome accession | NZ_CP040798 |
| Coordinates | 1838044..1838538 (-) | Length | 164 a.a. |
| NCBI ID | WP_002896496.1 | Uniprot ID | A0A2X3XJA2 |
| Organism | Streptococcus sanguinis strain CGMH058 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1833044..1843538
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDP16_RS09100 (FDP16_09500) | uvrA | 1833058..1835889 (-) | 2832 | WP_176799411.1 | excinuclease ABC subunit UvrA | - |
| FDP16_RS09105 (FDP16_09505) | - | 1836018..1836962 (+) | 945 | WP_176799807.1 | magnesium transporter CorA family protein | - |
| FDP16_RS09110 (FDP16_09510) | - | 1836981..1837655 (+) | 675 | WP_002919618.1 | DUF1129 domain-containing protein | - |
| FDP16_RS09115 (FDP16_09515) | rpsR | 1837768..1838007 (-) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| FDP16_RS09120 (FDP16_09520) | ssbA | 1838044..1838538 (-) | 495 | WP_002896496.1 | single-stranded DNA-binding protein | Machinery gene |
| FDP16_RS09125 (FDP16_09525) | rpsF | 1838550..1838840 (-) | 291 | WP_002896497.1 | 30S ribosomal protein S6 | - |
| FDP16_RS09130 (FDP16_09530) | hutI | 1839019..1840284 (-) | 1266 | WP_176799412.1 | imidazolonepropionase | - |
| FDP16_RS09135 (FDP16_09535) | - | 1840484..1842514 (+) | 2031 | WP_176799413.1 | urocanate hydratase | - |
| FDP16_RS09140 (FDP16_09540) | ftcD | 1842629..1843528 (+) | 900 | WP_176799414.1 | glutamate formimidoyltransferase | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18104.75 Da Isoelectric Point: 4.7187
>NTDB_id=367239 FDP16_RS09120 WP_002896496.1 1838044..1838538(-) (ssbA) [Streptococcus sanguinis strain CGMH058]
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRSNREGQSSGGYGGNSFGGSSAPSYGSADSSNQVPNFSRDESPFGNSNPMDISDD
DLPF
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRSNREGQSSGGYGGNSFGGSSAPSYGSADSSNQVPNFSRDESPFGNSNPMDISDD
DLPF
Nucleotide
Download Length: 495 bp
>NTDB_id=367239 FDP16_RS09120 WP_002896496.1 1838044..1838538(-) (ssbA) [Streptococcus sanguinis strain CGMH058]
ATGATTAATAACGTTGTACTGGTGGGTCGCATGACCCGTGATGCCGAGCTTCGCTATACTCCGCAGAACCAAGCGGTCGC
AACATTTACTCTGGCTGTCAATCGTAACTTTAAAAATCAAAGTGGCGAGCGAGAAGCAGACTTTATCAATGTTGTCATCT
GGCGTCAGCAGGCAGAAAATCTTGCAAACTGGGCTAAAAAAGGAGCCCTGATCGGAATTACAGGCCGTATTCAAACGCGT
AACTACGAGAATCAGCAAGGCCAGCGTGTCTATGTCACAGAAGTTGTTGCGGACAATTTCCAACTCTTGGAAAGCCGCTC
TAATCGTGAAGGTCAGTCATCTGGCGGGTACGGTGGGAACAGCTTCGGCGGCAGCTCTGCTCCAAGTTATGGCAGTGCAG
ACTCGTCTAACCAAGTACCGAACTTTTCTCGTGATGAGAGCCCATTTGGCAATTCTAACCCGATGGATATCTCAGACGAC
GATCTACCTTTCTAA
ATGATTAATAACGTTGTACTGGTGGGTCGCATGACCCGTGATGCCGAGCTTCGCTATACTCCGCAGAACCAAGCGGTCGC
AACATTTACTCTGGCTGTCAATCGTAACTTTAAAAATCAAAGTGGCGAGCGAGAAGCAGACTTTATCAATGTTGTCATCT
GGCGTCAGCAGGCAGAAAATCTTGCAAACTGGGCTAAAAAAGGAGCCCTGATCGGAATTACAGGCCGTATTCAAACGCGT
AACTACGAGAATCAGCAAGGCCAGCGTGTCTATGTCACAGAAGTTGTTGCGGACAATTTCCAACTCTTGGAAAGCCGCTC
TAATCGTGAAGGTCAGTCATCTGGCGGGTACGGTGGGAACAGCTTCGGCGGCAGCTCTGCTCCAAGTTATGGCAGTGCAG
ACTCGTCTAACCAAGTACCGAACTTTTCTCGTGATGAGAGCCCATTTGGCAATTCTAACCCGATGGATATCTCAGACGAC
GATCTACCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.14 |
100 |
0.61 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.471 |
100 |
0.585 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
64.634 |
0.366 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
51.724 |
70.732 |
0.366 |