Detailed information NTG0366335

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FGE23_RS02315
• Genome accession: NZ_CP040672
• Coordinates: 467044..468207 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain X030
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 462044..473207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGE23_RS02285	-	462309..462728 (-)	420	WP_146275632.1	TIGR03826 family flagellar region protein	-
FGE23_RS02290	comFC	462802..463491 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
FGE23_RS02295	-	463497..463781 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
FGE23_RS02300	comFA	463839..465224 (-)	1386	WP_146275634.1	DEAD/DEAH box helicase	Machinery gene
FGE23_RS02305	-	465332..466180 (-)	849	WP_003151387.1	DegV family protein	-
FGE23_RS02310	degU	466278..466967 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
FGE23_RS02315	degS	467044..468207 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
FGE23_RS02320	-	468430..469077 (+)	648	WP_060657503.1	YigZ family protein	-
FGE23_RS02325	-	469082..470257 (+)	1176	WP_146275636.1	LCP family protein	-
FGE23_RS02330	-	470347..471423 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
FGE23_RS02335	tuaH	471556..472752 (-)	1197	WP_070082461.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=366335 FGE23_RS02315 WP_015387626.1 467044..468207(-) (degS) [Bacillus amyloliquefaciens strain X030]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=366335 FGE23_RS02315 WP_015387626.1 467044..468207(-) (degS) [Bacillus amyloliquefaciens strain X030]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946