Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   M594_RS08355 Genome accession   NZ_CP047883
Coordinates   1726175..1728511 (-) Length   778 a.a.
NCBI ID   WP_173876533.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V3-A4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1721175..1733511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS08335 (M594_08375) serS 1721405..1722679 (+) 1275 WP_049544783.1 serine--tRNA ligase -
  M594_RS08340 (M594_08380) - 1722703..1723602 (-) 900 WP_173876530.1 TDT family transporter -
  M594_RS08345 (M594_08385) - 1723829..1724377 (-) 549 WP_000206768.1 carboxymuconolactone decarboxylase family protein -
  M594_RS08350 (M594_08390) - 1724510..1725832 (-) 1323 WP_173876532.1 alanine/glycine:cation symporter family protein -
  M594_RS08355 (M594_08395) mutS/mutS2 1726175..1728511 (-) 2337 WP_173876533.1 endonuclease MutS2 Machinery gene
  M594_RS08360 (M594_08400) - 1728729..1729277 (-) 549 WP_173876535.1 CvpA family protein -
  M594_RS08365 (M594_08405) zapA 1729274..1729576 (-) 303 WP_000002019.1 cell division protein ZapA -
  M594_RS08370 (M594_08410) rnhC 1729663..1730544 (+) 882 WP_173876536.1 ribonuclease HIII -
  M594_RS08375 (M594_08415) lepB 1730548..1731162 (+) 615 WP_173876538.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87544.52 Da        Isoelectric Point: 7.0886

>NTDB_id=366332 M594_RS08355 WP_173876533.1 1726175..1728511(-) (mutS/mutS2) [Streptococcus mitis strain S022-V3-A4]
MNKKILETLEFNKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEMKEMQALFVEQPHFTILATKEIAGVCKRLEM
GADLNIEEFLLLKRVLLASRELQSFYANLENVSLEELALWFEKLHDFPQLQGNLQAFNDAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQMLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMLRILQEISERVRPHAAEIANDAWIIGRLDLIRAKLRFIQERQAVVPQLSENQEIQLLHVCHPLVKNAVANDVHFGQD
LTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG
RSNAFEIAKRLGLSEVIVGDASQQVDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVDMALSESDQILKNLHSKSQLKPHEIIEAKAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLTSQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEKQVKKKQVNVVKRTSGRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=366332 M594_RS08355 WP_173876533.1 1726175..1728511(-) (mutS/mutS2) [Streptococcus mitis strain S022-V3-A4]
ATGAACAAGAAAATATTAGAAACATTAGAGTTCAATAAGGTCAAGGCCTTGTTTGAACCCCATTTGTTGACCGAGCAGGG
CTTGGAGCAATTGAGACAGCTGGCTCCGACTGCTAAGGCAGATAAAATCAAACAGGCTTTTGCTGAGATGAAGGAAATGC
AGGCACTCTTTGTTGAGCAACCGCATTTTACCATTCTTGCAACCAAGGAAATCGCAGGAGTCTGCAAGCGGTTGGAGATG
GGAGCGGACCTCAATATCGAGGAGTTCCTCCTCTTGAAGCGCGTGCTTCTTGCCAGCCGAGAACTGCAAAGTTTTTACGC
CAATCTGGAAAATGTCAGCTTGGAAGAATTAGCTCTTTGGTTTGAGAAATTACATGATTTTCCGCAATTACAAGGAAATC
TTCAGGCCTTTAATGATGCAGGTTTCATTGAAAATTTTGCCAGTGAAGAATTGGCGCGCATCCGTCGAAAAATCCATGAT
AGCGAGAGTCAGGTACGCGATGTCTTGCAAGATTTGCTCAAACAAAAAGCGCAGATGTTGACAGAAGGGATTGTTGCCAG
TAGAAATGGCCGTCAGGTTCTACCTGTCAAAAACACCTACCGCAATAAGATTGCAGGTGTCGTTCATGATATTTCTGCTA
GTGGAAATACCGTCTATATTGAACCCCGTGAGGTGGTCAAACTGAGCGAAGAAATTGCCAGTTTACGAGCAGATGAGCGC
TATGAAATGCTTCGCATTCTCCAAGAAATTTCTGAGCGTGTTCGCCCTCATGCGGCTGAGATTGCCAATGATGCTTGGAT
TATCGGCCGTTTGGATTTGATTCGTGCCAAGCTTCGTTTTATCCAAGAAAGGCAAGCAGTAGTTCCTCAGCTATCAGAAA
ATCAAGAGATTCAACTGCTCCATGTCTGCCATCCTTTGGTCAAAAATGCCGTTGCAAATGATGTCCATTTTGGTCAAGAT
TTAACAGCGATTGTCATTACAGGTCCCAATACAGGTGGGAAGACCATCATGCTTAAAACTCTGGGCTTGACACAGGTTAT
GGCCCAGTCCGGTTTGCCGATTTTAGCAGACAAGGGAAGTCGTGTTGGTATTTTTGAAGAAATTTTTGCTGATATTGGCG
ATGAACAGTCTATTGAACAGAGCTTGTCTACCTTCTCTAGCCACATGACCAATATTGTGGATATTCTTGGCAAGGTCAAC
CAACATTCACTCTTACTCTTGGATGAGTTGGGGGCTGGTACAGATCCTCAAGAAGGAGCAGCCCTTGCTATGGCTATTTT
AGAGGACCTTCGCCTGCGTCAAGTCAAGACTATGGCTACTACTCACTATCCAGAGCTCAAGGCCTACGGTATCGAGACAG
CCTTTGTGCAAAATGCCAGCATGGAGTTTGATACTGCAACTCTTCGCCCGACCTATCGCTTTATGCAGGGTGTTCCTGGT
CGAAGCAATGCCTTTGAAATTGCCAAACGTCTAGGACTATCTGAAGTTATCGTAGGAGATGCTAGCCAGCAGGTCGATCA
GGACAATGATGTCAACCGGATTATTGAGCAACTGGAAGAGCAGACGCTTGAAAGTCGTAAACGCTTGGACAATATCCGTG
AGGTGGAGCAAGAAAATCTCAAGATGAACCGTGCTCTCAAAAAACTTTACAACGAGCTCAATCGTGAAAAGGAAACCGAG
CTTAATAAGGCGCGTGAACAGGCTGCTGAGATTGTGGACATGGCCCTAAGTGAGAGTGACCAGATTCTTAAAAATCTCCA
TAGTAAATCTCAACTCAAGCCCCACGAAATTATTGAAGCCAAGGCCAAGTTGAAAAAATTGGCTCCTGAAAAAGTAGATT
TGTCTAAAAACAAGGTCCTTCAAAAGGCCAAGAAAAAACGAGCTCCAAAGGTGGGAGATGATATCGTGGTGCTCAGCTAT
GGTCAGCGAGGTACCTTGACCAGTCAACTCAAGGACGGCCGCTGGGAAGCCCAAGTCGGATTGATTAAGATGACCTTGGA
AGAGAAAGAATTTGACCTTGTTCAAGCTCAGCAAGAAAAGCAGGTCAAGAAGAAACAAGTCAATGTTGTGAAACGAACTT
CTGGTCGTGGTCCACAAGCCAGACTGGATCTTCGAGGAAAACGCTATGAAGAAGCTATGAATGAGCTAGATGCCTTTATC
GACCAAGCCTTGCTTAACAATATGGCTCAAGTTGATATCATCCATGGTATCGGAACAGGTGTTATCCGTGAAGGTGTCAC
CAAATACCTACAAAGAAACAAACATGTCAAGAGTTTCGGCTATGCCCCACAAAATGCGGGAGGCAGTGGTGCGACTATTG
TCACTTTTAAAGGATAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-506)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.582

100

0.413

Multiple sequence alignment