Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   SMUNN2025_RS04655 Genome accession   NC_013928
Coordinates   937987..939300 (+) Length   437 a.a.
NCBI ID   WP_002283039.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 932987..944300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS04625 (SmuNN2025_0891) - 933017..933250 (+) 234 WP_002262193.1 DUF1858 domain-containing protein -
  SMUNN2025_RS04630 (SmuNN2025_0892) - 933250..934614 (+) 1365 WP_002283038.1 DUF438 domain-containing protein -
  SMUNN2025_RS04635 (SmuNN2025_0893) - 934741..935469 (-) 729 WP_002270207.1 ABC transporter permease -
  SMUNN2025_RS04640 (SmuNN2025_0894) - 935466..936206 (-) 741 WP_002268161.1 ABC transporter permease -
  SMUNN2025_RS04645 (SmuNN2025_0895) - 936206..937115 (-) 910 Protein_883 ABC transporter ATP-binding protein -
  SMUNN2025_RS04650 (SmuNN2025_0897) scnR 937297..937986 (+) 690 WP_002266795.1 response regulator transcription factor Regulator
  SMUNN2025_RS04655 (SmuNN2025_0898) scnK 937987..939300 (+) 1314 WP_002283039.1 sensor histidine kinase Regulator
  SMUNN2025_RS04660 (SmuNN2025_0899) truB 939386..940267 (+) 882 WP_002277831.1 tRNA pseudouridine(55) synthase TruB -
  SMUNN2025_RS04665 (SmuNN2025_0900) - 940298..941218 (+) 921 WP_012997755.1 bifunctional riboflavin kinase/FAD synthetase -
  SMUNN2025_RS04670 (SmuNN2025_0901) spx 941279..941692 (+) 414 WP_002263835.1 transcriptional regulator Spx -
  SMUNN2025_RS04675 - 941685..941963 (+) 279 WP_002265496.1 UPF0223 family protein -
  SMUNN2025_RS04680 (SmuNN2025_0902) - 941953..942711 (+) 759 WP_002262204.1 inositol monophosphatase family protein -
  SMUNN2025_RS04685 (SmuNN2025_0903) - 942775..944079 (+) 1305 WP_002277832.1 RsmF rRNA methyltransferase first C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 437 a.a.        Molecular weight: 50348.33 Da        Isoelectric Point: 9.6090

>NTDB_id=36591 SMUNN2025_RS04655 WP_002283039.1 937987..939300(+) (scnK) [Streptococcus mutans NN2025]
MDTVKFFTKLLTKYVLLVFALIVGVIFVYGLVFLTYLNYYGKEKPELVYTKIAQSSQQDAFNISKRSQKEMDKQKTWAMV
LNQDGQIVQSYRLPQQLKRHYTNADMVKFSRWYLDDYPVFSYVRGQQILVFGYPKKYSLAKFNFYLNTQFIKNFLHLGFV
FLGIIFLFIFVLFSRSKLRIKKEIEPIVSALTFLSQGQSAALNEKGNLSEIKTALNETSHILEESNMMKEQWIRGVSHDL
RNPLMLISGYTSQLEQQYGHGKQTEQIENQIQNMKEMISNLNLSYLLDNQKRHSKFSSLDLAVVLRSVIADILNNYETVI
LHFDLPAEAVLVKGDATLLERAFKNLLLNSIRHSGSNQIDLTYQLFDNKVIIIIADKGTITAQKIVELNQKSTNYESHGM
GTVITKQIIKLHQGETVFSDNHPGLKVTIVLPVTDEF

Nucleotide


Download         Length: 1314 bp        

>NTDB_id=36591 SMUNN2025_RS04655 WP_002283039.1 937987..939300(+) (scnK) [Streptococcus mutans NN2025]
ATGGATACCGTTAAATTTTTTACGAAGTTATTGACCAAGTATGTTCTATTAGTATTTGCCTTAATTGTAGGAGTTATTTT
TGTTTATGGCTTGGTTTTCTTAACCTATCTTAATTATTATGGAAAGGAAAAACCAGAGCTAGTTTACACCAAAATCGCTC
AATCGAGTCAACAAGATGCGTTCAATATTAGTAAAAGAAGTCAAAAAGAAATGGATAAACAAAAGACTTGGGCTATGGTA
TTAAATCAAGATGGTCAGATCGTCCAATCTTATCGTTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
GAAATTTTCGCGCTGGTATTTAGACGATTATCCTGTTTTTTCCTATGTACGTGGTCAGCAGATTTTAGTTTTTGGCTACC
CTAAAAAGTATTCCCTAGCAAAGTTTAATTTTTATCTGAATACGCAATTTATTAAAAATTTTCTTCATTTAGGGTTTGTT
TTCTTAGGCATCATCTTTTTATTTATCTTTGTTCTTTTTAGTCGTTCAAAGCTGCGCATTAAAAAGGAAATAGAGCCGAT
TGTCTCTGCGCTCACTTTCCTGTCGCAAGGTCAAAGTGCTGCTCTTAATGAAAAAGGCAATCTTTCTGAAATTAAGACAG
CTCTCAATGAAACTTCTCATATTTTAGAAGAAAGTAATATGATGAAAGAACAGTGGATTAGAGGAGTCAGTCACGATTTG
CGCAACCCGCTGATGCTGATTTCAGGCTACACCAGTCAATTGGAACAACAATATGGTCATGGAAAGCAAACGGAGCAGAT
TGAAAATCAGATTCAAAATATGAAAGAAATGATTTCTAATCTCAATTTGAGCTACCTGTTGGATAATCAAAAGCGTCATT
CCAAATTTTCAAGCCTTGATTTAGCTGTTGTCCTGCGATCCGTAATTGCTGATATTCTAAATAATTATGAAACAGTTATA
CTTCATTTTGATTTACCTGCAGAGGCGGTATTGGTAAAGGGTGATGCCACTTTATTAGAAAGGGCTTTTAAAAATCTTCT
GCTCAATAGTATTAGGCATAGTGGCTCTAATCAGATCGATTTGACTTATCAATTATTTGATAATAAAGTGATTATTATCA
TTGCAGATAAGGGAACTATTACAGCTCAGAAAATTGTAGAACTAAATCAAAAATCAACTAATTATGAGTCGCATGGCATG
GGCACCGTTATCACTAAGCAAATCATAAAACTTCATCAAGGTGAGACTGTCTTTTCAGATAATCATCCAGGTTTGAAAGT
GACGATTGTCTTGCCTGTAACGGATGAATTTTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(334-434)

His Kinase A (phospho-acceptor) domain (HisKA)

(228-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

98.856

100

0.989

Multiple sequence alignment