Detailed information NTG0364402

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FEO94_RS16670
• Genome accession: NZ_CP040433
• Coordinates: 3629344..3630717 (+)
• Length: 457 a.a.
• NCBI ID: WP_075676419.1
• Uniprot ID: A0AAJ1ULX5
• Organism: Stenotrophomonas maltophilia strain SKK55
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3624344..3635717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FEO94_RS16655 (FEO94_16805)	sucD	3625193..3626068 (-)	876	WP_005418610.1	succinate--CoA ligase subunit alpha	-
FEO94_RS16660 (FEO94_16810)	sucC	3626093..3627262 (-)	1170	WP_005418614.1	ADP-forming succinate--CoA ligase subunit beta	-
FEO94_RS16665 (FEO94_16815)	-	3627670..3629283 (+)	1614	WP_134968485.1	ATP-binding protein	-
FEO94_RS16670 (FEO94_16820)	pilR	3629344..3630717 (+)	1374	WP_075676419.1	sigma-54 dependent transcriptional regulator	Regulator
FEO94_RS16675 (FEO94_16825)	pilB	3630891..3632621 (-)	1731	WP_154351295.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FEO94_RS16680 (FEO94_16830)	-	3632781..3633614 (-)	834	WP_185807474.1	sterol desaturase family protein	-
FEO94_RS16685 (FEO94_16835)	pilA/pilAI	3633814..3634242 (-)	429	WP_072167642.1	pilin	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49654.90 Da
• Isoelectric Point: 6.4421

>NTDB_id=364402 FEO94_RS16670 WP_075676419.1 3629344..3630717(+) (pilR) [Stenotrophomonas maltophilia strain SKK55]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNTERPAPGPAAEQGARLLGDSPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAASVLARLARSHGRPTPLLAPSALDALAQYAFPGNVRELENILERALALAEEDRIGADDLRLPQHAPRTPGSAAHAEAV
VDLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=364402 FEO94_RS16670 WP_075676419.1 3629344..3630717(+) (pilR) [Stenotrophomonas maltophilia strain SKK55]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTACTGACGCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCAGCCAACCTTGCCGAAGCGCGCGAACTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCGGACGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACTGCCTTCGGCAGCATGGACCTGGCGGTGGAAGCGCTGAAGGCCGGCGCCTTCGATTTCGTCAGCAAGCCGGT
GGACATCGCCGTGCTGCGTGGCCTGGTCAAGCACGCGCTGGAACTGAACAACACCGAGCGCCCTGCACCCGGCCCTGCCG
CCGAACAGGGCGCACGCCTGCTTGGCGACTCGCCGGCCATGGACGTGCTGCGTACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGTGAATCCGGCGTGGGCAAGGAACTGGTCGCACGCACCATCCACGCCCAGGGCGCCCG
CGCGGCCGGCCCGTTCGTACCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGGCTGTTCCAGGCCGCCCATGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCCCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTCGGCGCCGC
CAACGAGGAGCCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGGCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGTCGCCAGGACCTGCCGGAA
CTGGCCGCGTCGGTGCTGGCACGGCTGGCCCGCAGCCACGGCCGCCCGACGCCGTTGCTGGCGCCGTCGGCATTGGATGC
ACTGGCCCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTGGAACGCGCGCTGGCCCTGGCCGAAGAAG
ACCGCATCGGCGCCGACGACCTGCGCCTGCCGCAGCATGCCCCGCGCACGCCCGGCAGCGCAGCACACGCCGAAGCCGTG
GTGGACCTGCAGCCCGGCAGCGCCGCCCTGCCCTCGTACATCGAACAGCTCGAACGCAGCGCCATCCAGCGCGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCCGCGCAGTTGGGGATTACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.939	99.781	0.628
pilR	Acinetobacter baumannii strain A118	48.38	100	0.49