Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FEM41_RS11020 | Genome accession | NZ_CP040428 |
| Coordinates | 2388128..2388448 (+) | Length | 106 a.a. |
| NCBI ID | WP_138096018.1 | Uniprot ID | A0A4P8YNG8 |
| Organism | Jejubacter calystegiae strain KSNA2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2383128..2393448
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEM41_RS11010 (FEM41_11010) | hupB | 2385605..2385877 (+) | 273 | WP_138096016.1 | nucleoid-associated protein HU-beta | - |
| FEM41_RS11015 (FEM41_11015) | ppiD | 2386105..2387976 (+) | 1872 | WP_138096017.1 | peptidylprolyl isomerase | - |
| FEM41_RS11020 (FEM41_11020) | comEA | 2388128..2388448 (+) | 321 | WP_138096018.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| FEM41_RS11025 (FEM41_11025) | - | 2388595..2388996 (+) | 402 | WP_241666630.1 | YbgC/FadM family acyl-CoA thioesterase | - |
| FEM41_RS11030 (FEM41_11030) | - | 2389165..2390448 (+) | 1284 | WP_138096020.1 | HlyD family secretion protein | - |
| FEM41_RS11035 (FEM41_11035) | - | 2390438..2392597 (+) | 2160 | WP_138096021.1 | peptidase domain-containing ABC transporter | - |
| FEM41_RS11040 (FEM41_11040) | - | 2392608..2392970 (+) | 363 | WP_168198781.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11250.86 Da Isoelectric Point: 5.0659
>NTDB_id=364326 FEM41_RS11020 WP_138096018.1 2388128..2388448(+) (comEA) [Jejubacter calystegiae strain KSNA2]
MKTLLSPLWLTLALLVNGSVAHAASEEVTPQSPVPALITASESQISINTASAEELAEALNGIGLKKAQSIVRYREENGQF
ASIDDLRSVPGVGNALVERNLSRLKL
MKTLLSPLWLTLALLVNGSVAHAASEEVTPQSPVPALITASESQISINTASAEELAEALNGIGLKKAQSIVRYREENGQF
ASIDDLRSVPGVGNALVERNLSRLKL
Nucleotide
Download Length: 321 bp
>NTDB_id=364326 FEM41_RS11020 WP_138096018.1 2388128..2388448(+) (comEA) [Jejubacter calystegiae strain KSNA2]
ATGAAGACTTTACTATCCCCCCTGTGGCTTACCCTGGCGCTGCTCGTCAACGGTAGCGTCGCTCACGCGGCATCTGAGGA
GGTAACCCCCCAGTCGCCGGTACCGGCCCTTATTACCGCCTCTGAATCCCAGATCAGTATCAATACGGCTTCGGCAGAGG
AGCTGGCAGAGGCGCTTAACGGCATTGGTCTGAAGAAGGCACAATCCATCGTGCGTTATCGGGAAGAGAACGGCCAGTTC
GCCAGCATTGACGATCTGCGTTCGGTGCCGGGCGTTGGCAATGCGCTGGTGGAGCGGAATTTGTCCCGCCTTAAGCTTTA
A
ATGAAGACTTTACTATCCCCCCTGTGGCTTACCCTGGCGCTGCTCGTCAACGGTAGCGTCGCTCACGCGGCATCTGAGGA
GGTAACCCCCCAGTCGCCGGTACCGGCCCTTATTACCGCCTCTGAATCCCAGATCAGTATCAATACGGCTTCGGCAGAGG
AGCTGGCAGAGGCGCTTAACGGCATTGGTCTGAAGAAGGCACAATCCATCGTGCGTTATCGGGAAGAGAACGGCCAGTTC
GCCAGCATTGACGATCTGCGTTCGGTGCCGGGCGTTGGCAATGCGCTGGTGGAGCGGAATTTGTCCCGCCTTAAGCTTTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
49.057 |
100 |
0.491 |
| comEA | Vibrio cholerae strain A1552 |
49.057 |
100 |
0.491 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
38.938 |
100 |
0.415 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.434 |
93.396 |
0.406 |