Detailed information NTG0364294

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FE003_RS15010
• Genome accession: NZ_CP040425
• Coordinates: 3065957..3067075 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain PB364
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3060957..3072075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FE003_RS15000 (FE003_15000)	-	3064073..3064765 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
FE003_RS15005 (FE003_15005)	pilT	3064892..3065929 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
FE003_RS15010 (FE003_15010)	pilU	3065957..3067075 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FE003_RS15015 (FE003_15015)	fur	3067145..3067582 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
FE003_RS15020 (FE003_15020)	-	3067694..3068092 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
FE003_RS15025 (FE003_15025)	-	3068147..3068470 (-)	324	WP_000442587.1	RnfH family protein	-
FE003_RS15030 (FE003_15030)	-	3068470..3069537 (-)	1068	WP_002019572.1	hypothetical protein	-
FE003_RS15040 (FE003_15040)	-	3069690..3070145 (-)	456	WP_000782976.1	bacteriohemerythrin	-
FE003_RS15045 (FE003_15045)	-	3070398..3071246 (-)	849	WP_138067753.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=364294 FE003_RS15010 WP_000347039.1 3065957..3067075(+) (pilU) [Acinetobacter baumannii strain PB364]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=364294 FE003_RS15010 WP_000347039.1 3065957..3067075(+) (pilU) [Acinetobacter baumannii strain PB364]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395