Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LLO_RS04500 | Genome accession | NC_013861 |
| Coordinates | 1006843..1007442 (+) | Length | 199 a.a. |
| NCBI ID | WP_012978910.1 | Uniprot ID | D3HQQ1 |
| Organism | Legionella longbeachae NSW150 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1001843..1012442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLO_RS04485 (llo0873) | - | 1003547..1004977 (-) | 1431 | WP_003632475.1 | hypothetical protein | - |
| LLO_RS04490 (llo0874) | pilM | 1005214..1006278 (+) | 1065 | WP_003632474.1 | type IV pilus assembly protein PilM | Machinery gene |
| LLO_RS04495 (llo0875) | pilN | 1006283..1006846 (+) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| LLO_RS04500 (llo0876) | pilO | 1006843..1007442 (+) | 600 | WP_012978910.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LLO_RS04505 (llo0877) | pilP | 1007439..1007945 (+) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| LLO_RS04510 (llo0878) | pilQ | 1007954..1010059 (+) | 2106 | WP_012978911.1 | type IV pilus secretin PilQ | Machinery gene |
| LLO_RS04515 (llo0879) | aroK | 1010395..1010922 (+) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
| LLO_RS04520 (llo0880) | aroB | 1010909..1012012 (+) | 1104 | WP_003632468.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22815.54 Da Isoelectric Point: 6.2556
>NTDB_id=36373 LLO_RS04500 WP_012978910.1 1006843..1007442(+) (pilO) [Legionella longbeachae NSW150]
MNTINLSELTLENVGQWPLIVKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
MNTINLSELTLENVGQWPLIVKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=36373 LLO_RS04500 WP_012978910.1 1006843..1007442(+) (pilO) [Legionella longbeachae NSW150]
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAGTAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAGTAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
70.352 |
100 |
0.704 |
| comO | Acinetobacter baylyi ADP1 |
42.021 |
94.472 |
0.397 |
| pilO | Acinetobacter baumannii D1279779 |
38.421 |
95.477 |
0.367 |