Detailed information NTG0363552

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: FE254_RS08750
• Genome accession: NZ_CP040349
• Coordinates: 1911717..1913930 (+)
• Length: 737 a.a.
• NCBI ID: WP_273254908.1
• Uniprot ID: -
• Organism: Pseudomonas guguanensis strain HMFL31
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1906717..1918930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FE254_RS08725 (FE254_08775)	-	1906961..1907527 (-)	567	WP_273254858.1	PilZ domain-containing protein	-
FE254_RS08730 (FE254_08780)	-	1907820..1909067 (+)	1248	WP_273254859.1	lipoprotein-releasing ABC transporter permease subunit	-
FE254_RS08735 (FE254_08785)	lolD	1909072..1909773 (+)	702	WP_024307562.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
FE254_RS08740 (FE254_08790)	-	1909773..1911017 (+)	1245	WP_273254860.1	lipoprotein-releasing ABC transporter permease subunit	-
FE254_RS08745 (FE254_08795)	-	1911055..1911582 (-)	528	WP_024307564.1	DUF2062 domain-containing protein	-
FE254_RS08750 (FE254_08800)	comA	1911717..1913930 (+)	2214	WP_273254908.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FE254_RS08755 (FE254_08810)	exbB	1914267..1914899 (+)	633	WP_013714801.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
FE254_RS08760 (FE254_08815)	-	1914896..1915324 (+)	429	WP_090426166.1	biopolymer transporter ExbD	-
FE254_RS08765 (FE254_08820)	lpxK	1915325..1916326 (+)	1002	WP_273254861.1	tetraacyldisaccharide 4'-kinase	-
FE254_RS08770 (FE254_08825)	-	1916349..1916534 (+)	186	WP_013714804.1	Trm112 family protein	-
FE254_RS08775 (FE254_08830)	kdsB	1916535..1917299 (+)	765	WP_273254862.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FE254_RS08780 (FE254_08835)	-	1917299..1917763 (+)	465	WP_273254863.1	low molecular weight protein-tyrosine-phosphatase	-
FE254_RS08785 (FE254_08840)	murB	1917760..1918779 (+)	1020	WP_273254864.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 80143.19 Da
• Isoelectric Point: 9.2549

>NTDB_id=363552 FE254_RS08750 WP_273254908.1 1911717..1913930(+) (comA) [Pseudomonas guguanensis strain HMFL31]
MLALALGLLTLRFLPSLPPGWLLLAAACAGLSLLFTRVYPLGFFLLGLAWACSSAQSALDDRLDPQLDGRTLWLEGRVVG
LPEVSDGVVRFLLEEAHSRRAELPKRIRVAWYGGPRVQGGERWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGATGTIKA
GERLAPASGLGSWRDGLRQRLLAVPAFQREGAIAALVLGDGSGLSTGDWRLLQHTGTVHLMVISGQHIALLAGFLYGLVA
LLAKLGAWPARWPWLPCACALALSGALIYGVLAGFEVPVRRACVMVALVLLWRMRFRHLGAWWPLLLALIVVLLLEPLAS
LQPGFWLSFSAVAVLVLVFGGRLGVWGWWRGLTRAQWTMAIGLLPMMLILGLPVSSSGPLANLVAVPWVGMVVVPLALLG
TLLLPVPVVGEGLLWLAGGALHLLFELLGVIAEWLPAWLPSDLPLWAWLLAAAGALLLLLPAGVPLRLPGLALLLPALLL
PPKQLLDGRADVWVLDVGQGLAVLVRTREHALLYDAGPRFGDFDTGERIVLPSLRALNVRHLDLMLLSHADNDHAGGALA
IKAGMPVRRVISGEPQRLADALGAEACESGQSWQWNEVTFRLWQWQRASSGNQLSCVLQIEAAGERLLLTGDIDVQAERA
LTQADFPLASHWLLAPHHGSRTSSSQAFIDAVEAQHVLITRSRHNAFGHPHPQVLERYRAAGVEVHDTALDGALHLRLGE
HAAARALRREPRFWREK

Nucleotide

• Length: 2214 bp

>NTDB_id=363552 FE254_RS08750 WP_273254908.1 1911717..1913930(+) (comA) [Pseudomonas guguanensis strain HMFL31]
ATGTTGGCGCTGGCCTTGGGGTTATTGACGCTGCGTTTTCTGCCGAGCCTGCCACCAGGCTGGCTCTTGCTGGCTGCAGC
CTGTGCCGGTCTGTCCTTGCTGTTCACGCGCGTCTACCCGCTGGGGTTCTTCCTGCTGGGGCTGGCCTGGGCCTGCAGCT
CCGCACAATCGGCGCTGGATGATCGTCTCGATCCACAACTCGATGGTCGTACCCTTTGGCTGGAGGGGCGTGTGGTCGGG
CTGCCCGAAGTATCCGATGGTGTCGTGCGCTTTCTGCTGGAGGAGGCGCACTCGCGTCGCGCCGAGTTGCCGAAAAGAAT
ACGGGTGGCCTGGTATGGCGGGCCACGGGTGCAGGGCGGTGAGCGATGGCGTCTGGCAGTCAACCTGAAACGCCCGCATG
GTCTGGTCAATCCGCAGAGTTTCGACTACGAGGCCTGGTTGCTGGCTCAGCGTATTGGCGCCACGGGCACGATCAAAGCC
GGGGAGCGTCTGGCTCCCGCTTCGGGCCTGGGAAGTTGGCGCGACGGTTTGCGTCAGCGCCTGTTGGCCGTACCGGCCTT
TCAGCGAGAAGGCGCCATCGCCGCTCTGGTCCTGGGTGACGGGTCGGGCCTGAGCACCGGCGATTGGCGCCTGTTGCAGC
ACACCGGTACGGTGCATCTGATGGTCATCTCCGGGCAGCACATCGCGCTGCTGGCCGGCTTTCTCTACGGCCTGGTGGCG
TTACTGGCAAAGCTCGGCGCATGGCCGGCGCGCTGGCCATGGCTACCCTGCGCCTGTGCCCTGGCGCTGAGCGGAGCCTT
GATCTACGGCGTGTTGGCGGGTTTCGAGGTGCCGGTGCGCAGGGCCTGCGTGATGGTCGCGCTGGTGCTGCTGTGGCGCA
TGCGCTTTCGCCATCTGGGCGCATGGTGGCCGCTGTTGCTGGCCTTGATCGTGGTTCTGCTGCTGGAGCCATTGGCTTCG
CTACAGCCTGGTTTCTGGCTGTCGTTCTCGGCGGTGGCGGTGCTTGTTCTGGTATTCGGCGGTCGGCTCGGCGTCTGGGG
CTGGTGGCGCGGACTCACGCGTGCGCAATGGACCATGGCCATCGGCCTGCTGCCGATGATGCTGATCCTCGGCCTGCCGG
TCAGCAGCAGCGGGCCGCTGGCCAACCTGGTCGCCGTACCCTGGGTCGGGATGGTGGTCGTGCCCCTGGCTTTGCTGGGC
ACCTTGTTGCTGCCGGTTCCCGTCGTCGGGGAGGGGCTTCTGTGGCTGGCCGGCGGTGCGCTGCACCTGCTGTTCGAACT
GCTCGGCGTTATTGCCGAGTGGCTACCTGCCTGGCTGCCGAGCGATCTGCCGCTATGGGCCTGGCTGCTGGCAGCGGCAG
GAGCGTTGTTGCTCCTGCTGCCGGCCGGTGTGCCGCTGCGTCTACCCGGCCTTGCACTGTTGCTGCCGGCCTTGCTGTTG
CCGCCAAAGCAACTGCTCGATGGCCGTGCCGATGTCTGGGTGCTGGACGTGGGGCAGGGCCTGGCGGTGCTGGTGCGTAC
CCGGGAACACGCCCTGCTGTATGACGCCGGGCCGCGCTTCGGCGATTTCGATACGGGTGAGCGCATCGTCCTGCCCTCGT
TGCGCGCGCTGAACGTCCGGCATCTCGATCTGATGCTGCTCAGCCATGCAGACAACGATCACGCTGGCGGCGCGTTGGCG
ATCAAGGCCGGGATGCCGGTGAGGCGGGTGATCAGCGGTGAGCCGCAAAGGCTGGCCGACGCGCTCGGCGCGGAAGCTTG
CGAGTCCGGGCAGAGCTGGCAATGGAACGAGGTGACCTTCAGGTTGTGGCAGTGGCAGCGGGCCAGCTCTGGCAACCAGC
TGTCCTGTGTCCTGCAGATCGAGGCAGCGGGCGAACGTCTGCTGTTGACCGGCGATATCGACGTGCAGGCCGAGCGGGCA
CTGACGCAGGCAGACTTTCCCCTGGCCTCGCATTGGTTGCTGGCGCCGCATCACGGCAGTCGCACTTCGTCCAGCCAGGC
CTTTATCGATGCGGTCGAGGCGCAACATGTTCTGATCACCCGCAGTCGCCACAACGCCTTTGGCCATCCGCACCCGCAGG
TGCTGGAGCGTTATCGGGCCGCAGGTGTCGAGGTACATGACACCGCGCTCGACGGCGCACTGCATCTGCGCCTGGGCGAG
CATGCCGCAGCGCGGGCGTTGCGACGCGAGCCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-672)

• Competence protein (Competence) (196-461)

• Domain of unknown function (DUF4131) (DUF4131) (16-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	68.245	97.422	0.665
comA	Ralstonia pseudosolanacearum GMI1000	36.658	100	0.399