Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EUC40_RS25990 | Genome accession | NZ_CP040336 |
| Coordinates | 5132813..5133334 (+) | Length | 173 a.a. |
| NCBI ID | WP_002113227.1 | Uniprot ID | A0A1D3MWM3 |
| Organism | Bacillus luti strain FJ | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5127813..5138334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EUC40_RS25960 | spo0J | 5128287..5129138 (+) | 852 | WP_001051824.1 | stage 0 sporulation protein Spo0J | - |
| EUC40_RS25965 | yyaC | 5129159..5129755 (-) | 597 | WP_001020706.1 | spore protease YyaC | - |
| EUC40_RS25970 | - | 5130013..5130870 (+) | 858 | WP_156576875.1 | mechanosensitive ion channel family protein | - |
| EUC40_RS25975 | - | 5130892..5131089 (+) | 198 | WP_000436054.1 | DUF951 domain-containing protein | - |
| EUC40_RS25980 | ychF | 5131204..5132304 (+) | 1101 | WP_000524657.1 | redox-regulated ATPase YchF | - |
| EUC40_RS25985 | rpsF | 5132496..5132786 (+) | 291 | WP_001233782.1 | 30S ribosomal protein S6 | - |
| EUC40_RS25990 | ssbA | 5132813..5133334 (+) | 522 | WP_002113227.1 | single-stranded DNA-binding protein | Machinery gene |
| EUC40_RS25995 | rpsR | 5133380..5133613 (+) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| EUC40_RS26000 | - | 5133694..5134629 (+) | 936 | WP_071711685.1 | YybS family protein | - |
| EUC40_RS26005 | - | 5134708..5136681 (+) | 1974 | WP_001113893.1 | DHH family phosphoesterase | - |
| EUC40_RS26010 | rplI | 5136678..5137124 (+) | 447 | WP_071711684.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18751.54 Da Isoelectric Point: 4.9222
>NTDB_id=363377 EUC40_RS25990 WP_002113227.1 5132813..5133334(+) (ssbA) [Bacillus luti strain FJ]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYDGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNPGNSGNTGNSGFTKNDDPFSNV
GQPIDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYDGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNPGNSGNTGNSGFTKNDDPFSNV
GQPIDISDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=363377 EUC40_RS25990 WP_002113227.1 5132813..5133334(+) (ssbA) [Bacillus luti strain FJ]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGATGGACAAGATGGTAAACGTGTATATGTAACAGAAGTTCTTGCGGAGAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGCGGTTCATTCAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATCCGGGTAACTCAGGTAACACTGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGATGGACAAGATGGTAAACGTGTATATGTAACAGAAGTTCTTGCGGAGAGCGTACAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGCGGTTCATTCAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTG
GTCAATCTAGTAATCCGGGTAACTCAGGTAACACTGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTA
GGTCAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
70.621 |
100 |
0.723 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.714 |
100 |
0.584 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
61.272 |
0.393 |
| ssb | Glaesserella parasuis strain SC1401 |
35.165 |
100 |
0.37 |