Detailed information NTG0361926

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FDM99_RS07180
• Genome accession: NZ_CP040080
• Coordinates: 1472376..1473494 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain SP304
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1467376..1478494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDM99_RS07145 (FDM99_07145)	-	1468205..1469053 (+)	849	WP_000336554.1	class II glutamine amidotransferase	-
FDM99_RS07150 (FDM99_07150)	-	1469306..1469761 (+)	456	WP_000782976.1	bacteriohemerythrin	-
FDM99_RS07160 (FDM99_07160)	-	1469914..1470981 (+)	1068	WP_002084046.1	hypothetical protein	-
FDM99_RS07165 (FDM99_07165)	-	1470981..1471304 (+)	324	WP_032025163.1	RnfH family protein	-
FDM99_RS07170 (FDM99_07170)	-	1471359..1471757 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
FDM99_RS07175 (FDM99_07175)	fur	1471869..1472306 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
FDM99_RS07180 (FDM99_07180)	pilU	1472376..1473494 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FDM99_RS07185 (FDM99_07185)	pilT	1473522..1474559 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
FDM99_RS07190 (FDM99_07190)	-	1474686..1475378 (+)	693	WP_032025162.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=361926 FDM99_RS07180 WP_000347039.1 1472376..1473494(-) (pilU) [Acinetobacter baumannii strain SP304]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=361926 FDM99_RS07180 WP_000347039.1 1472376..1473494(-) (pilU) [Acinetobacter baumannii strain SP304]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCGGATCTTTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTACAGTTACCACCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAAGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGCTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCGCTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAGGGTCCTGATCAATTATCAGACGGAAAGCAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395