Detailed information NTG0361816

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: FDF20_RS16850
• Genome accession: NZ_CP040050
• Coordinates: 3464751..3465233 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain VB16141
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3459751..3470233

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDF20_RS16815 (FDF20_16815)	-	3459859..3460893 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
FDF20_RS16820 (FDF20_16820)	-	3461008..3461949 (+)	942	WP_085946156.1	lipase family alpha/beta hydrolase	-
FDF20_RS16825 (FDF20_16825)	rplS	3462001..3462369 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
FDF20_RS16830 (FDF20_16830)	trmD	3462577..3463317 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
FDF20_RS16835 (FDF20_16835)	rimM	3463363..3463911 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
FDF20_RS16840 (FDF20_16840)	rpsP	3463931..3464182 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
FDF20_RS16845 (FDF20_16845)	pilE	3464329..3464754 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
FDF20_RS16850 (FDF20_16850)	pilY2	3464751..3465233 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
FDF20_RS16855 (FDF20_16855)	pilY1	3465246..3469100 (-)	3855	WP_045543713.1	PilC/PilY family type IV pilus protein	Machinery gene
FDF20_RS16860 (FDF20_16860)	pilX	3469112..3469930 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=361816 FDF20_RS16850 WP_001046417.1 3464751..3465233(-) (pilY2) [Acinetobacter baumannii strain VB16141]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=361816 FDF20_RS16850 WP_001046417.1 3464751..3465233(-) (pilY2) [Acinetobacter baumannii strain VB16141]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444