Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | FAH66_RS08995 | Genome accession | NZ_CP039887 |
| Coordinates | 1837516..1837803 (+) | Length | 95 a.a. |
| NCBI ID | WP_036472233.1 | Uniprot ID | A0A4D7WS56 |
| Organism | Neisseria subflava strain ATCC 49275 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1832516..1842803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAH66_RS08970 (FAH66_08970) | - | 1832969..1833472 (+) | 504 | WP_003684697.1 | hypothetical protein | - |
| FAH66_RS11155 | - | 1833538..1833663 (-) | 126 | WP_279638369.1 | hypothetical protein | - |
| FAH66_RS08975 (FAH66_08975) | - | 1833687..1834550 (-) | 864 | WP_137041347.1 | GNAT family N-acetyltransferase | - |
| FAH66_RS08980 (FAH66_08980) | - | 1834826..1835491 (-) | 666 | WP_137041348.1 | hypothetical protein | - |
| FAH66_RS08985 (FAH66_08985) | - | 1835641..1836294 (+) | 654 | WP_137041349.1 | IS1595 family transposase | - |
| FAH66_RS08990 (FAH66_08990) | - | 1836406..1837236 (-) | 831 | WP_137041108.1 | integrase core domain-containing protein | - |
| FAH66_RS08995 (FAH66_08995) | comE | 1837516..1837803 (+) | 288 | WP_036472233.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| FAH66_RS09000 (FAH66_09000) | pyrB | 1838181..1839101 (+) | 921 | WP_003684701.1 | aspartate carbamoyltransferase | - |
| FAH66_RS09005 (FAH66_09005) | pyrI | 1839112..1839573 (+) | 462 | WP_137041350.1 | aspartate carbamoyltransferase regulatory subunit | - |
| FAH66_RS09010 (FAH66_09010) | - | 1839626..1840456 (+) | 831 | WP_137041351.1 | integrase core domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9763.42 Da Isoelectric Point: 10.4923
>NTDB_id=360955 FAH66_RS08995 WP_036472233.1 1837516..1837803(+) (comE) [Neisseria subflava strain ATCC 49275]
MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEELKNVKGIGDAVLNKLKAEAT
VSSAAPKAAQPAVKK
MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEELKNVKGIGDAVLNKLKAEAT
VSSAAPKAAQPAVKK
Nucleotide
Download Length: 288 bp
>NTDB_id=360955 FAH66_RS08995 WP_036472233.1 1837516..1837803(+) (comE) [Neisseria subflava strain ATCC 49275]
ATGAAGAAATTTTTATTTGGTGCATTTGCCGCCGTCTGTGCGGCGTTCTCTTTGGCTGCCGTGAACATCAATACCGCGTC
TTCTGCCGAACTGGAGGCCTTGCCGGGTATCGGCCCGGCTAAGGCGAAATCGATTGTGGAATACCGTCAGAAGAACGGTG
CGTTCAAATCGGTGGAGGAGCTGAAAAACGTGAAGGGCATCGGTGATGCGGTGCTGAACAAGTTGAAGGCGGAGGCGACG
GTTTCTTCTGCCGCGCCTAAGGCCGCCCAGCCTGCCGTGAAAAAATAA
ATGAAGAAATTTTTATTTGGTGCATTTGCCGCCGTCTGTGCGGCGTTCTCTTTGGCTGCCGTGAACATCAATACCGCGTC
TTCTGCCGAACTGGAGGCCTTGCCGGGTATCGGCCCGGCTAAGGCGAAATCGATTGTGGAATACCGTCAGAAGAACGGTG
CGTTCAAATCGGTGGAGGAGCTGAAAAACGTGAAGGGCATCGGTGATGCGGTGCTGAACAAGTTGAAGGCGGAGGCGACG
GTTTCTTCTGCCGCGCCTAAGGCCGCCCAGCCTGCCGTGAAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
54.321 |
85.263 |
0.463 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.186 |
90.526 |
0.4 |