Detailed information NTG0036016

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: I33_RS13115
• Genome accession: NC_017195
• Coordinates: 2636410..2637015 (-)
• Length: 201 a.a.
• NCBI ID: WP_014477531.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. RO-NN-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2631410..2642015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I33_RS13085 (I33_2815)	-	2632222..2632611 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
I33_RS13090 (I33_2816)	yajC	2632668..2632934 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
I33_RS13095 (I33_2817)	tgt	2632972..2634117 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
I33_RS13100 (I33_2818)	queA	2634144..2635172 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
I33_RS13105 (I33_2819)	yrzS	2635202..2635402 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
I33_RS13110 (I33_2820)	ruvB	2635395..2636399 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I33_RS13115 (I33_2821)	ruvA	2636410..2637015 (-)	606	WP_014477531.1	Holliday junction branch migration protein RuvA	Machinery gene
I33_RS13120 (I33_2822)	bofC	2637154..2637666 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
I33_RS13125 (I33_2823)	csbX	2637714..2639021 (-)	1308	WP_014477532.1	MFS transporter	-
I33_RS13130 (I33_2824)	iolG	2639092..2640117 (-)	1026	WP_014477533.1	inositol 2-dehydrogenase	-
I33_RS13135 (I33_2825)	yrzF	2640354..2641001 (+)	648	WP_014477534.1	phosphotransferase	-
I33_RS21040 (I33_2826)	-	2641046..2641168 (-)	123	WP_014477535.1	hypothetical protein	-
I33_RS21385	-	2641253..2641327 (+)	75	Protein_2649	hypothetical protein	-
I33_RS21045 (I33_2827)	-	2641328..2641699 (+)	372	WP_259390387.1	DUF5412 domain-containing protein	-
I33_RS20570 (I33_2828)	-	2641706..2641846 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22585.07 Da
• Isoelectric Point: 5.1805

>NTDB_id=36016 I33_RS13115 WP_014477531.1 2636410..2637015(-) (ruvA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIEDEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=36016 I33_RS13115 WP_014477531.1 2636410..2637015(-) (ruvA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCA
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAGATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (69-126)

• RuvA N terminal domain (RuvA_N) (1-59)

• RuvA, C-terminal domain (RuvA_C) (155-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	99.502	100	0.995
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408