Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | LLKF_RS11850 | Genome accession | NC_013656 |
| Coordinates | 2410651..2410935 (-) | Length | 94 a.a. |
| NCBI ID | WP_012898619.1 | Uniprot ID | - |
| Organism | Lactococcus lactis subsp. lactis KF147 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2405651..2415935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLKF_RS11820 (LLKF_2360) | - | 2406092..2406469 (-) | 378 | WP_003129983.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LLKF_RS11825 (LLKF_2361) | - | 2406674..2407540 (+) | 867 | WP_012898615.1 | RluA family pseudouridine synthase | - |
| LLKF_RS11830 (LLKF_2362) | - | 2407578..2408387 (-) | 810 | WP_012898616.1 | metal ABC transporter permease | - |
| LLKF_RS11835 (LLKF_2363) | - | 2408380..2409117 (-) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| LLKF_RS11840 (LLKF_2364) | - | 2409294..2410136 (-) | 843 | WP_012898618.1 | metal ABC transporter substrate-binding protein | - |
| LLKF_RS11845 (LLKF_2365) | - | 2410133..2410570 (-) | 438 | WP_010906313.1 | zinc-dependent MarR family transcriptional regulator | - |
| LLKF_RS11850 (LLKF_2366) | comGG | 2410651..2410935 (-) | 285 | WP_012898619.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LLKF_RS11855 (LLKF_2367) | comGF | 2410974..2411420 (-) | 447 | WP_038603761.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LLKF_RS11860 (LLKF_2368) | comGE | 2411383..2411679 (-) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LLKF_RS11865 (LLKF_2369) | comGD | 2411651..2412082 (-) | 432 | WP_012898621.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LLKF_RS11870 (LLKF_2370) | comGC | 2412042..2412425 (-) | 384 | WP_012898622.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LLKF_RS11875 (LLKF_2371) | comGB | 2412439..2413512 (-) | 1074 | WP_012898623.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LLKF_RS11880 (LLKF_2372) | comGA | 2413406..2414344 (-) | 939 | WP_012898624.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LLKF_RS11885 | - | 2414614..2414796 (-) | 183 | WP_038603763.1 | hypothetical protein | - |
| LLKF_RS11890 (LLKF_2373) | - | 2414787..2415542 (-) | 756 | WP_012898625.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10826.14 Da Isoelectric Point: 6.2158
>NTDB_id=35922 LLKF_RS11850 WP_012898619.1 2410651..2410935(-) (comGG) [Lactococcus lactis subsp. lactis KF147]
MFSMFLKFYLQRQIDDARQLRSEKEQLTAELMVSIALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDEKTYQF
SIHLKDGTNFQIKN
MFSMFLKFYLQRQIDDARQLRSEKEQLTAELMVSIALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDEKTYQF
SIHLKDGTNFQIKN
Nucleotide
Download Length: 285 bp
>NTDB_id=35922 LLKF_RS11850 WP_012898619.1 2410651..2410935(-) (comGG) [Lactococcus lactis subsp. lactis KF147]
ATGTTTTCAATGTTTCTTAAGTTCTATTTGCAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACTGCTGAATTAATGGTGTCGATAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGAGATT
TGTCCTACAATTTACTGACAGATTCGTCAGCCAGTTCAAAAATTACTGACCATTCAAGTGATGAAAAAACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAATTAA
ATGTTTTCAATGTTTCTTAAGTTCTATTTGCAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACTGCTGAATTAATGGTGTCGATAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGAGATT
TGTCCTACAATTTACTGACAGATTCGTCAGCCAGTTCAAAAATTACTGACCATTCAAGTGATGAAAAAACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
59.14 |
98.936 |
0.585 |