Detailed information NTG0358371

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SB21_RS16985
• Genome accession: NZ_CP039380
• Coordinates: 3405871..3407076 (-)
• Length: 401 a.a.
• NCBI ID: WP_039063726.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LPL-K103
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3400871..3412076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SB21_RS16955 (SB21_16955)	-	3401136..3401555 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
SB21_RS16960 (SB21_16960)	comFC	3401629..3402318 (-)	690	WP_198161198.1	phosphoribosyltransferase family protein	Machinery gene
SB21_RS16965 (SB21_16965)	-	3402324..3402608 (-)	285	WP_007407481.1	competence protein ComFB	-
SB21_RS16970 (SB21_16970)	comFA	3402666..3404051 (-)	1386	WP_039063725.1	DEAD/DEAH box helicase	Machinery gene
SB21_RS16975 (SB21_16975)	-	3404159..3405007 (-)	849	WP_007407483.1	DegV family protein	-
SB21_RS16980 (SB21_16980)	degU	3405105..3405794 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
SB21_RS16985 (SB21_16985)	degS	3405871..3407076 (-)	1206	WP_039063726.1	sensor histidine kinase	Regulator
SB21_RS16990 (SB21_16990)	-	3407299..3407946 (+)	648	WP_007407485.1	YigZ family protein	-
SB21_RS16995 (SB21_16995)	-	3407951..3409171 (+)	1221	WP_039063727.1	LCP family protein	-
SB21_RS17000 (SB21_17000)	-	3409270..3410346 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
SB21_RS17005 (SB21_17005)	-	3410479..3411675 (-)	1197	WP_039063728.1	glycosyltransferase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 46741.74 Da
• Isoelectric Point: 7.5123

>NTDB_id=358371 SB21_RS16985 WP_039063726.1 3405871..3407076(-) (degS) [Bacillus velezensis strain LPL-K103]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRNLR
QNVRNALYEVRRIIYDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNAL
KHSESEEITVKVEVTADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLG
L

Nucleotide

• Length: 1206 bp

>NTDB_id=358371 SB21_RS16985 WP_039063726.1 3405871..3407076(-) (degS) [Bacillus velezensis strain LPL-K103]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAGCAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAATCTGCGG
CAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATATATGATTTAAGACCGATGGCATTGGACGATCTCGGGCT
GATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATACAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAG
ACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGCTTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTC
AAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTAACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGG
AAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAAGTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATC
TGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTGGGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGC
CTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (305-398)

• Histidine kinase (HisKA_3) (180-261)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	92.231	99.501	0.918