Detailed information NTG0357650

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GR130_RS06145
• Genome accession: NZ_CP047146
• Coordinates: 1468455..1469738 (+)
• Length: 427 a.a.
• NCBI ID: WP_159503761.1
• Uniprot ID: -
• Organism: Streptomyces sp. GS7
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1463455..1474738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR130_RS06115 (GR130_06115)	-	1463678..1464058 (-)	381	WP_159503758.1	arsenate reductase family protein	-
GR130_RS06130 (GR130_06130)	tig	1465252..1466649 (+)	1398	WP_159503759.1	trigger factor	-
GR130_RS06135 (GR130_06135)	clpP	1466951..1467553 (+)	603	WP_201305147.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR130_RS06140 (GR130_06140)	clpP	1467619..1468293 (+)	675	WP_159503760.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR130_RS06145 (GR130_06145)	clpX	1468455..1469738 (+)	1284	WP_159503761.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GR130_RS06150 (GR130_06150)	-	1469818..1470795 (-)	978	WP_159503762.1	hypothetical protein	-
GR130_RS06155 (GR130_06155)	-	1470948..1473569 (+)	2622	WP_159503763.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46727.53 Da
• Isoelectric Point: 4.8277

>NTDB_id=357650 GR130_RS06145 WP_159503761.1 1468455..1469738(+) (clpX) [Streptomyces sp. GS7]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQEP
AKKALSVAVYNHYKRVQAGENGPGRGDEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIEARSGAKGIGFGATIRSKREIESKDRLQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQAVMYEIPSRKDVARVVITE
DVVHSNVNPTLVPRTRGDSGEPQEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=357650 GR130_RS06145 WP_159503761.1 1468455..1469738(+) (clpX) [Streptomyces sp. GS7]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCAACGGCTACGTCGTCGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCGGTGGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGTGAGAACGGCCCGGGCCGCGGCGA
CGAGGGCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGACCC
TGGCCCGGATGCTCAACGTTCCCTTCGCGTTCGCCGACGCGACCGCGCTGACCGAGGCCGGCTATGTCGGCGAGGACGTC
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCCCACCAGGAATTCATCCAGATC
GACACCACCAACGTCCTCTTCATCGTCGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGGCCCGGTCCGGCGCCAA
GGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCGGCTCCAGGAGGTCATGCCGGAGG
ACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTCGACCGCGAG
GCGCTCCTGCAGATCCTGGTGGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGGCTCTTCGAACTCGACGGTGTGGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCGGCACCGGCGCCCGCGGTCTGCGCG
CCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGATCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACCGAG
GACGTGGTGCACTCCAACGTCAACCCGACCCTGGTCCCGCGCACCCGCGGCGACTCGGGCGAGCCCCAGGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.092	93.911	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.415	96.019	0.513