Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   E5Y90_RS13045 Genome accession   NZ_CP039143
Coordinates   2755494..2756633 (+) Length   379 a.a.
NCBI ID   WP_174660413.1    Uniprot ID   A0A6N0LJG9
Organism   Acinetobacter sp. 10FS3-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2750494..2761633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5Y90_RS13025 (E5Y90_13070) - 2750978..2753002 (-) 2025 WP_174660411.1 TonB-dependent copper receptor -
  E5Y90_RS13030 (E5Y90_13075) - 2753073..2753495 (-) 423 WP_151204695.1 DUF2946 family protein -
  E5Y90_RS13035 (E5Y90_13080) def 2753599..2754129 (-) 531 WP_151206858.1 peptide deformylase -
  E5Y90_RS13040 (E5Y90_13085) tsaP 2754250..2755404 (+) 1155 WP_174660412.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  E5Y90_RS13045 (E5Y90_13090) dprA 2755494..2756633 (+) 1140 WP_174660413.1 DNA-processing protein DprA Machinery gene
  E5Y90_RS13050 (E5Y90_13095) - 2756675..2757244 (+) 570 WP_151204699.1 Sua5/YciO/YrdC/YwlC family protein -
  E5Y90_RS13055 (E5Y90_13100) - 2757684..2758583 (-) 900 WP_174660414.1 DMT family transporter -
  E5Y90_RS13060 (E5Y90_13105) - 2758699..2759460 (+) 762 WP_174660415.1 AraC family transcriptional regulator -
  E5Y90_RS13065 (E5Y90_13110) - 2759642..2760235 (+) 594 WP_174660416.1 viral A-type inclusion protein -
  E5Y90_RS13070 (E5Y90_13115) - 2760367..2760909 (+) 543 WP_174660417.1 glutathione peroxidase -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42384.99 Da        Isoelectric Point: 6.6668

>NTDB_id=357230 E5Y90_RS13045 WP_174660413.1 2755494..2756633(+) (dprA) [Acinetobacter sp. 10FS3-1]
MLKSFSAAQLDMISLWYLVQHSLPSFYKIRQHYSHLGDALHPDQAPIWQALGIHANHVQRLKEFQLEASQQKFQQSLQSI
QRDSDFILLDSDPHYPQQLSPYNDRPPILFGQGRPDCLLQAQIALVGSRKPSAHGRQVAYDFASYLSEQGFYINSGLAQG
IDEAAHRAGLQQQGTIAVMGTGLDQTYPAQHQQLRQQIIAEGGAVISEFLPNTPPLQHHFPRRNRIVSGLSLGIIVAEAT
LKSGSLITAKLAAEQGKTVFAIPGHIYSEHHQGCHQLIREGAILVDHPEQVIEDLALPTQWQALQNSIKNETAAHEPSYI
PQHLISLYNQLDWVGQDLDHLSSQLRQDVATLTSQLMELELLGFSTQQAGMYLRCRVLK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=357230 E5Y90_RS13045 WP_174660413.1 2755494..2756633(+) (dprA) [Acinetobacter sp. 10FS3-1]
ATGTTGAAGTCCTTCTCGGCTGCGCAACTGGACATGATCAGTTTATGGTATCTGGTCCAGCATTCTCTGCCCAGTTTCTA
TAAAATCCGGCAGCACTATTCTCATCTGGGCGATGCCCTGCATCCTGATCAGGCACCCATCTGGCAAGCCTTAGGCATTC
ATGCCAATCATGTACAGCGGCTGAAAGAGTTTCAGCTCGAAGCTTCACAACAAAAGTTTCAGCAAAGTTTGCAGAGCATT
CAACGTGATAGTGACTTCATTCTGTTAGACAGTGATCCTCATTATCCGCAGCAGTTAAGCCCCTATAATGATCGTCCGCC
GATTCTATTTGGCCAGGGTCGGCCAGATTGTTTGTTACAGGCACAGATTGCTCTGGTGGGCAGTCGCAAGCCCAGTGCGC
ATGGCCGTCAGGTCGCTTATGATTTTGCCAGTTATCTGAGCGAACAGGGTTTTTATATTAATAGCGGACTTGCACAAGGG
ATTGATGAAGCCGCCCATCGCGCCGGACTGCAACAGCAAGGCACCATTGCAGTAATGGGAACCGGCCTGGACCAGACTTA
TCCGGCCCAGCATCAGCAGCTGCGCCAGCAAATTATTGCTGAGGGTGGAGCTGTCATTAGCGAATTTTTACCCAATACCC
CGCCCTTACAACACCATTTCCCACGGCGCAACCGGATTGTCAGTGGGCTGAGTCTCGGCATTATCGTGGCAGAGGCCACC
TTAAAAAGTGGCTCGCTCATTACGGCCAAACTGGCTGCGGAGCAAGGCAAAACAGTCTTTGCCATTCCGGGGCATATTTA
TAGTGAGCATCATCAGGGTTGTCATCAACTGATTCGTGAAGGAGCCATTTTAGTTGATCATCCCGAGCAGGTGATTGAAG
ATCTGGCCCTGCCGACCCAATGGCAAGCCCTGCAAAACTCCATCAAAAATGAAACAGCAGCACATGAGCCGTCTTACATT
CCGCAACATCTGATCTCCCTGTATAACCAGCTGGACTGGGTTGGACAAGATCTGGATCATTTAAGCAGTCAGCTCAGGCA
AGATGTCGCTACTCTTACCAGCCAGCTGATGGAACTTGAGCTTTTGGGCTTTAGTACCCAGCAAGCCGGCATGTATCTGC
GTTGTCGTGTACTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N0LJG9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.298

99.208

0.628

  dprA Acinetobacter baumannii D1279779

62.5

99.208

0.62

  dprA Acinetobacter baylyi ADP1

59.58

100

0.599


Multiple sequence alignment