Detailed information NTG0357227

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: E5Y90_RS12815
• Genome accession: NZ_CP039143
• Coordinates: 2702785..2704203 (+)
• Length: 472 a.a.
• NCBI ID: WP_373688374.1
• Uniprot ID: -
• Organism: Acinetobacter sp. 10FS3-1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2697785..2709203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5Y90_RS12795 (E5Y90_12840)	thrC	2698031..2699170 (+)	1140	WP_151204050.1	threonine synthase	-
E5Y90_RS12800 (E5Y90_12845)	-	2699280..2700329 (-)	1050	WP_151204051.1	serine hydrolase	-
E5Y90_RS12805 (E5Y90_12850)	-	2700550..2701185 (+)	636	WP_151204052.1	response regulator	-
E5Y90_RS12810 (E5Y90_12855)	pilS	2701204..2702766 (+)	1563	WP_174660383.1	sensor histidine kinase	Regulator
E5Y90_RS12815 (E5Y90_12860)	pilR	2702785..2704203 (+)	1419	WP_373688374.1	sigma-54-dependent transcriptional regulator	Regulator
E5Y90_RS12820 (E5Y90_12865)	-	2704204..2705376 (-)	1173	WP_174660385.1	S41 family peptidase	-
E5Y90_RS12825 (E5Y90_12870)	gpmI	2705403..2706950 (-)	1548	WP_174660386.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
E5Y90_RS12830 (E5Y90_12875)	lptG	2707074..2708144 (-)	1071	WP_174660387.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 53530.65 Da
• Isoelectric Point: 6.1685

>NTDB_id=357227 E5Y90_RS12815 WP_373688374.1 2702785..2704203(+) (pilR) [Acinetobacter sp. 10FS3-1]
MVEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKQRLTDHQYDACLTDLNLPDGNGLELLHWIHQRCPDLPV
AVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVEYDQYNANDSLEHKLLIGQSLPIQQLRVTLKKIAR
SQAPVFITGESGTGKEVIANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLD
EIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISASHQDLDALVQQGKFRQDLYFRIHVMDLVLPPLRERGQDIL
ILAEHFIQKICQEWDIPVKPLSGRSKEFLLGQYYPGNVRELRNIIERAITLSDEDRIDLQHLQSAPLRHTAPVLQESTSH
AELASSDQIIIPRKLPEEGLELYLEKIEKEVLLNALNMTHWNRTLAAKKLGMSFRSLRYRLKKFGLDIEEEE

Nucleotide

• Length: 1419 bp

>NTDB_id=357227 E5Y90_RS12815 WP_373688374.1 2702785..2704203(+) (pilR) [Acinetobacter sp. 10FS3-1]
ATTGTGGAACAACAACCACTGGTCTTATTGGTGGATGACGAAGAGGATCTCTGTACCCTCATGCAGATGTCCTTGATGCG
CATGGGAATACGTACACATATTGCTCACCGGCTGGAGGATGCTAAGCAGCGCCTTACTGATCACCAGTATGATGCCTGTC
TGACTGACCTGAATCTACCGGATGGCAATGGCCTGGAATTATTGCACTGGATTCATCAGCGCTGCCCTGATCTGCCTGTG
GCTGTACTAACCGCCTATGGCAATATGGAAATCGCCATTGCGGCCCTCAAAGCAGGCGCTTTTGACTTTGTCAGCAAGCC
GATTAACCAGAAGCATCTGGAACAGTTACTACAAAAAGCACTTAATAAACCAGTGGAGTATGATCAATATAATGCCAATG
ATTCACTAGAACATAAGCTACTGATTGGCCAGTCTCTGCCCATTCAGCAGCTACGTGTCACTTTAAAGAAAATTGCTCGT
TCTCAGGCGCCGGTTTTTATTACAGGAGAATCCGGTACCGGCAAGGAAGTAATTGCAAATCTGGTGCATCGCCTCAGTAA
TCGCAGTGAAGGGCCTTTTATCGCCATTAACTGTGGTGCGATTCCAACTGAACTGATGGAAAGTGAGCTGTTCGGACACA
AAAAAGGCAGCTTTACCGGTGCCACCCAGGACAAGCAAGGACTGATCCAGTCTGCGCATGGTGGCAGTCTGTTTCTGGAT
GAAATTGCCGAATTACCTTTGAGCATGCAGGTCAAACTGCTACGCGCCGTTCAGGAAAAACGTATCCGCCCCTTAGGTTC
AGATACTGAAATTGATGTCGATTTTCGGGTAATCAGCGCCAGCCATCAGGATCTGGATGCTCTGGTACAACAAGGCAAAT
TCCGTCAGGACCTGTATTTCCGGATTCATGTCATGGATCTAGTCTTGCCGCCACTACGTGAACGCGGTCAGGATATTCTG
ATTTTGGCTGAGCACTTTATCCAGAAAATTTGCCAGGAATGGGATATTCCGGTGAAACCACTTTCTGGGCGCAGCAAAGA
GTTTTTACTGGGCCAGTATTATCCAGGGAATGTGCGTGAATTACGCAATATTATCGAACGGGCCATTACCTTAAGTGATG
AGGACAGGATTGATCTGCAACACCTGCAAAGCGCTCCTCTGCGCCATACAGCGCCTGTCCTGCAAGAGTCGACAAGCCAT
GCTGAACTTGCTTCTTCAGATCAGATTATTATTCCCAGAAAGCTGCCTGAAGAAGGTCTGGAATTATATTTAGAAAAAAT
CGAAAAAGAAGTTCTGCTGAATGCACTGAATATGACCCACTGGAACCGCACCTTGGCTGCGAAAAAACTGGGCATGTCCT
TCCGCTCTCTGCGTTACCGCCTGAAAAAATTCGGACTGGATATCGAGGAAGAGGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	75.368	100	0.758
pilR	Pseudomonas aeruginosa PAK	48.913	97.458	0.477