Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | E5Y90_RS12445 | Genome accession | NZ_CP039143 |
| Coordinates | 2624897..2625535 (-) | Length | 212 a.a. |
| NCBI ID | WP_174660345.1 | Uniprot ID | A0A6N0LH12 |
| Organism | Acinetobacter sp. 10FS3-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2619897..2630535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5Y90_RS12425 (E5Y90_12475) | aroK | 2620890..2621426 (-) | 537 | WP_151205184.1 | shikimate kinase AroK | - |
| E5Y90_RS12430 (E5Y90_12480) | pilQ | 2621463..2623637 (-) | 2175 | WP_174660344.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| E5Y90_RS12435 (E5Y90_12485) | pilP | 2623654..2624181 (-) | 528 | WP_151205182.1 | pilus assembly protein PilP | Machinery gene |
| E5Y90_RS12440 (E5Y90_12490) | pilO | 2624181..2624900 (-) | 720 | WP_151205181.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| E5Y90_RS12445 (E5Y90_12495) | comN | 2624897..2625535 (-) | 639 | WP_174660345.1 | PilN domain-containing protein | Machinery gene |
| E5Y90_RS12450 (E5Y90_12500) | pilM | 2625535..2626593 (-) | 1059 | WP_151205179.1 | pilus assembly protein PilM | Machinery gene |
| E5Y90_RS12455 (E5Y90_12505) | ponA | 2626760..2629303 (+) | 2544 | WP_174660346.1 | penicillin-binding protein PBP1a | - |
| E5Y90_RS12460 (E5Y90_12510) | - | 2629361..2630170 (-) | 810 | WP_174660606.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23779.99 Da Isoelectric Point: 5.0934
>NTDB_id=357220 E5Y90_RS12445 WP_174660345.1 2624897..2625535(-) (comN) [Acinetobacter sp. 10FS3-1]
MARINLLPWRDELRVKRNNEFVAIGVGALFLGLAAAGSTWFYYDHKLQDQEQANQLIVSTNQNLDVQLKALEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSNMYITKFQRSGDKFTIEGKAESPNTVAELLRNLEASFWYRNAFMNAFLV
AEASKEKAPSSVIPRVEESYGSFTVTVDLDQINQPVLTEEQQPVSPAAGASS
MARINLLPWRDELRVKRNNEFVAIGVGALFLGLAAAGSTWFYYDHKLQDQEQANQLIVSTNQNLDVQLKALEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSNMYITKFQRSGDKFTIEGKAESPNTVAELLRNLEASFWYRNAFMNAFLV
AEASKEKAPSSVIPRVEESYGSFTVTVDLDQINQPVLTEEQQPVSPAAGASS
Nucleotide
Download Length: 639 bp
>NTDB_id=357220 E5Y90_RS12445 WP_174660345.1 2624897..2625535(-) (comN) [Acinetobacter sp. 10FS3-1]
ATGGCAAGAATTAACTTACTTCCTTGGCGTGATGAGCTAAGAGTTAAAAGAAATAATGAATTTGTGGCAATTGGTGTGGG
GGCACTTTTTCTGGGGTTAGCAGCAGCAGGATCGACCTGGTTTTACTATGACCATAAGCTGCAGGATCAGGAACAGGCCA
ATCAGCTAATTGTCAGTACGAACCAAAATCTGGATGTGCAGCTGAAGGCTCTGGAGGGCTTGCAAGAACAGCGTAATGCC
ATTGTGGAACGCATGAAGCTGATTCAGGGCTTACAGACCCAGCGCCCAATTGCGGTGCATCTGATTGATGAGATTGTACG
GGTCACTCCAAGCAATATGTACATTACCAAATTTCAGCGTAGTGGTGATAAATTTACCATTGAAGGTAAAGCTGAAAGCC
CGAATACGGTTGCAGAATTATTACGTAATCTGGAAGCTTCCTTCTGGTACCGGAATGCGTTTATGAATGCGTTTCTGGTG
GCAGAAGCCTCAAAAGAAAAAGCGCCTAGTTCGGTTATTCCACGTGTGGAAGAATCCTATGGAAGTTTTACGGTAACGGT
TGATCTGGATCAGATTAATCAACCTGTCCTGACCGAAGAACAACAGCCAGTTAGTCCTGCAGCGGGAGCATCATCATGA
ATGGCAAGAATTAACTTACTTCCTTGGCGTGATGAGCTAAGAGTTAAAAGAAATAATGAATTTGTGGCAATTGGTGTGGG
GGCACTTTTTCTGGGGTTAGCAGCAGCAGGATCGACCTGGTTTTACTATGACCATAAGCTGCAGGATCAGGAACAGGCCA
ATCAGCTAATTGTCAGTACGAACCAAAATCTGGATGTGCAGCTGAAGGCTCTGGAGGGCTTGCAAGAACAGCGTAATGCC
ATTGTGGAACGCATGAAGCTGATTCAGGGCTTACAGACCCAGCGCCCAATTGCGGTGCATCTGATTGATGAGATTGTACG
GGTCACTCCAAGCAATATGTACATTACCAAATTTCAGCGTAGTGGTGATAAATTTACCATTGAAGGTAAAGCTGAAAGCC
CGAATACGGTTGCAGAATTATTACGTAATCTGGAAGCTTCCTTCTGGTACCGGAATGCGTTTATGAATGCGTTTCTGGTG
GCAGAAGCCTCAAAAGAAAAAGCGCCTAGTTCGGTTATTCCACGTGTGGAAGAATCCTATGGAAGTTTTACGGTAACGGT
TGATCTGGATCAGATTAATCAACCTGTCCTGACCGAAGAACAACAGCCAGTTAGTCCTGCAGCGGGAGCATCATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
68.9 |
98.585 |
0.679 |
| pilN | Acinetobacter baumannii D1279779 |
66.351 |
99.528 |
0.66 |