Detailed information
Bioinformatically predicted
Overview
| Name | pilL-C | Type | Machinery gene |
| Locus tag | GQX72_RS07330 | Genome accession | NZ_CP047059 |
| Coordinates | 1597806..1598186 (+) | Length | 126 a.a. |
| NCBI ID | WP_000045526.1 | Uniprot ID | Q6BBL2 |
| Organism | Vibrio cholerae isolate CTMA_1441 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1592806..1603186
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQX72_RS07305 (GQX72_07305) | - | 1593398..1594054 (+) | 657 | WP_000974695.1 | HEAT repeat domain-containing protein | - |
| GQX72_RS07310 (GQX72_07310) | - | 1594065..1594910 (+) | 846 | WP_001002907.1 | protein-glutamate O-methyltransferase CheR | - |
| GQX72_RS07315 (GQX72_07315) | - | 1594910..1595281 (+) | 372 | WP_170967465.1 | PleD family two-component system response regulator | - |
| GQX72_RS07320 (GQX72_07320) | - | 1595290..1597563 (+) | 2274 | WP_001178898.1 | chemotaxis protein CheA | - |
| GQX72_RS07325 (GQX72_07325) | - | 1597553..1597813 (+) | 261 | WP_001143862.1 | hypothetical protein | - |
| GQX72_RS07330 (GQX72_07330) | pilL-C | 1597806..1598186 (+) | 381 | WP_000045526.1 | response regulator | Machinery gene |
| GQX72_RS07335 (GQX72_07335) | - | 1598194..1599429 (+) | 1236 | WP_000621946.1 | methyl-accepting chemotaxis protein | - |
| GQX72_RS07340 (GQX72_07340) | - | 1599484..1599798 (-) | 315 | WP_000312387.1 | multidrug efflux SMR transporter | - |
| GQX72_RS07345 (GQX72_07345) | - | 1599944..1601458 (-) | 1515 | WP_000411504.1 | cryptochrome/deoxyribodipyrimidine photo-lyase family protein | - |
| GQX72_RS07350 (GQX72_07350) | - | 1601614..1603020 (-) | 1407 | WP_000545341.1 | MDR family MFS transporter | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13674.04 Da Isoelectric Point: 9.8959
>NTDB_id=357217 GQX72_RS07330 WP_000045526.1 1597806..1598186(+) (pilL-C) [Vibrio cholerae isolate CTMA_1441]
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Nucleotide
Download Length: 381 bp
>NTDB_id=357217 GQX72_RS07330 WP_000045526.1 1597806..1598186(+) (pilL-C) [Vibrio cholerae isolate CTMA_1441]
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL-C | Synechocystis sp. PCC 6803 |
39.2 |
99.206 |
0.389 |