Detailed information NTG0356934

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: A7X85_RS17265
• Genome accession: NZ_CP047019
• Coordinates: 3908406..3909695 (-)
• Length: 429 a.a.
• NCBI ID: WP_109362284.1
• Uniprot ID: A0ABW9I797
• Organism: Streptomyces sp. ST1015
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3903406..3914695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7X85_RS17255 (A7X85_17330)	-	3904591..3907212 (-)	2622	WP_112472160.1	valine--tRNA ligase	-
A7X85_RS17260 (A7X85_17335)	-	3907349..3908335 (+)	987	WP_112472161.1	hypothetical protein	-
A7X85_RS17265 (A7X85_17340)	clpX	3908406..3909695 (-)	1290	WP_109362284.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
A7X85_RS17270 (A7X85_17345)	clpP	3909877..3910557 (-)	681	WP_109362260.1	ATP-dependent Clp protease proteolytic subunit	Regulator
A7X85_RS17275 (A7X85_17350)	clpP	3910988..3911608 (-)	621	WP_055723189.1	ATP-dependent Clp protease proteolytic subunit	Regulator
A7X85_RS17280 (A7X85_17355)	tig	3911849..3913237 (-)	1389	WP_162650074.1	trigger factor	-
A7X85_RS17295 (A7X85_17370)	-	3913756..3913950 (-)	195	WP_010355309.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46881.70 Da
• Isoelectric Point: 4.7788

>NTDB_id=356934 A7X85_RS17265 WP_109362284.1 3908406..3909695(-) (clpX) [Streptomyces sp. ST1015]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEARAGAKGIGFGATIRSKRELQSKDQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGGRGPGEQKSA

Nucleotide

• Length: 1290 bp

>NTDB_id=356934 A7X85_RS17265 WP_109362284.1 3908406..3909695(-) (clpX) [Streptomyces sp. ST1015]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCGGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAGAGCCG
CGAGGACGCCATCGAGCTCGCGAAGTCCAACATCCTCCTGCTCGGCCCCACCGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACCGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACCGCGTCGGTGCCCCCGCAGGGCGGCCGTAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGGCTGGAGAAGATCATCGAGGCCCGCGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAACTCCAGTCGAAGGACCAGTTCGAGGAGGTCATGCCCG
AGGACCTCGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCATCGAGCCCCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCACGTGTCGTCATCACC
GCGGACGTCGTCCTCTCCAACGTCAACCCGACGCTGATCCCGCGCGATTCACGCGGCGGCCGGGGACCGGGGGAGCAGAA
GTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	95.804	0.52