Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ArsFIN_RS17630 | Genome accession | NZ_CP038613 |
| Coordinates | 3491078..3491614 (-) | Length | 178 a.a. |
| NCBI ID | WP_026822913.1 | Uniprot ID | A0A4P7L5A7 |
| Organism | Arsenophonus nasoniae strain FIN | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3486078..3496614
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ArsFIN_RS17600 (ArsFIN_37910) | - | 3486960..3487529 (+) | 570 | WP_026822915.1 | M10 family metallopeptidase C-terminal domain-containing protein | - |
| ArsFIN_RS17605 | - | 3487601..3488089 (+) | 489 | Protein_3539 | DDE-type integrase/transposase/recombinase | - |
| ArsFIN_RS17610 (ArsFIN_37920) | - | 3488193..3488602 (-) | 410 | Protein_3540 | recombinase family protein | - |
| ArsFIN_RS17615 (ArsFIN_37930) | - | 3489064..3489609 (-) | 546 | Protein_3541 | type III toxin-antitoxin system ToxN/AbiQ family toxin | - |
| ArsFIN_RS17625 (ArsFIN_37940) | - | 3490132..3490812 (+) | 681 | WP_026822914.1 | hypothetical protein | - |
| ArsFIN_RS17630 (ArsFIN_37950) | ssb | 3491078..3491614 (-) | 537 | WP_026822913.1 | single-stranded DNA-binding protein | Machinery gene |
| ArsFIN_RS17635 (ArsFIN_37960) | uvrA | 3491893..3494727 (+) | 2835 | WP_026822912.1 | excinuclease ABC subunit UvrA | - |
| ArsFIN_RS17640 (ArsFIN_37970) | - | 3495234..3495719 (+) | 486 | WP_026822911.1 | phenolic acid decarboxylase | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19260.39 Da Isoelectric Point: 5.2420
>NTDB_id=355224 ArsFIN_RS17630 WP_026822913.1 3491078..3491614(-) (ssb) [Arsenophonus nasoniae strain FIN]
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQSGEMREKTEWHRVVIFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGARGGSQEGMPQNNPASGWGQPQQPQQTQQFSGNAPASAPAAHSGKT
APATPAEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQSGEMREKTEWHRVVIFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGARGGSQEGMPQNNPASGWGQPQQPQQTQQFSGNAPASAPAAHSGKT
APATPAEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=355224 ArsFIN_RS17630 WP_026822913.1 3491078..3491614(-) (ssb) [Arsenophonus nasoniae strain FIN]
ATGGCCAGCAGAGGCGTTAACAAAGTCATACTTATCGGCAACTTGGGACAAGATCCTGAAATTCGTTATATGCCAAATGG
TGGTGCGGTTGCGAATCTTACGCTGGCCACCTCTGAAAGTTGGCGTGATAAGCAAAGTGGTGAAATGCGCGAAAAAACAG
AATGGCACCGTGTTGTGATCTTTGGCAAGCTGGCTGAAGTGGCAGGTGAATATTTGCGTAAAGGTTCACAAGTTTATATT
GAAGGCTCACTACAAACCCGTAAATGGCAAGATCAAAGTGGCCAGGATCGCTACTCAACTGAAGTGGTAGTAAATATTGG
TGGTACCATGCAAATGTTAGGCGCGCGTGGCGGCTCACAGGAGGGTATGCCACAAAATAATCCAGCCAGTGGCTGGGGAC
AACCACAACAGCCACAACAAACTCAGCAGTTTAGTGGTAACGCACCAGCATCAGCGCCAGCCGCCCATTCCGGTAAAACC
GCTCCCGCGACACCGGCTGAGCCACCCATGGATTTCGATGATGATATTCCGTTTTAA
ATGGCCAGCAGAGGCGTTAACAAAGTCATACTTATCGGCAACTTGGGACAAGATCCTGAAATTCGTTATATGCCAAATGG
TGGTGCGGTTGCGAATCTTACGCTGGCCACCTCTGAAAGTTGGCGTGATAAGCAAAGTGGTGAAATGCGCGAAAAAACAG
AATGGCACCGTGTTGTGATCTTTGGCAAGCTGGCTGAAGTGGCAGGTGAATATTTGCGTAAAGGTTCACAAGTTTATATT
GAAGGCTCACTACAAACCCGTAAATGGCAAGATCAAAGTGGCCAGGATCGCTACTCAACTGAAGTGGTAGTAAATATTGG
TGGTACCATGCAAATGTTAGGCGCGCGTGGCGGCTCACAGGAGGGTATGCCACAAAATAATCCAGCCAGTGGCTGGGGAC
AACCACAACAGCCACAACAAACTCAGCAGTTTAGTGGTAACGCACCAGCATCAGCGCCAGCCGCCCATTCCGGTAAAACC
GCTCCCGCGACACCGGCTGAGCCACCCATGGATTTCGATGATGATATTCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.73 |
100 |
0.725 |
| ssb | Glaesserella parasuis strain SC1401 |
56.383 |
100 |
0.596 |
| ssb | Neisseria meningitidis MC58 |
47.514 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.514 |
100 |
0.483 |