Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SaO217_RS09455 Genome accession   NZ_CP038461
Coordinates   1950423..1951466 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain O217     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1945423..1956466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO217_RS09425 (SaO217_1821) - 1945844..1947100 (-) 1257 WP_199878552.1 aminopeptidase -
  SaO217_RS09430 (SaO217_1822) - 1947103..1947303 (-) 201 WP_000180460.1 DUF1128 family protein -
  SaO217_RS09435 (SaO217_1823) - 1947450..1947914 (+) 465 WP_000228670.1 low molecular weight protein-tyrosine-phosphatase -
  SaO217_RS09440 (SaO217_1824) - 1947921..1948196 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  SaO217_RS09445 (SaO217_1825) - 1948474..1949691 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  SaO217_RS09450 (SaO217_1826) vraR 1949804..1950433 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  SaO217_RS09455 (SaO217_1827) vraS 1950423..1951466 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SaO217_RS09460 (SaO217_1828) liaF 1951463..1952164 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  SaO217_RS09465 (SaO217_1829) - 1952179..1952565 (-) 387 WP_001110178.1 hypothetical protein -
  SaO217_RS09470 (SaO217_1830) map 1952782..1953540 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  SaO217_RS09475 (SaO217_1831) - 1954177..1955163 (+) 987 WP_001014423.1 FUSC family protein -
  SaO217_RS09480 (SaO217_1832) - 1955352..1955765 (-) 414 WP_001667305.1 hypothetical protein -
  SaO217_RS09485 - 1955794..1955904 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=354589 SaO217_RS09455 WP_001017131.1 1950423..1951466(-) (vraS) [Staphylococcus aureus strain O217]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=354589 SaO217_RS09455 WP_001017131.1 1950423..1951466(-) (vraS) [Staphylococcus aureus strain O217]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment