Detailed information NTG0353967

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: GO596_RS02830
• Genome accession: NZ_CP046628
• Coordinates: 563790..564788 (-)
• Length: 332 a.a.
• NCBI ID: WP_021141399.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU 77-23
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 558790..569788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO596_RS02805 (GO596_02805)	thrC	559125..560609 (-)	1485	WP_157339174.1	threonine synthase	-
GO596_RS02815 (GO596_02815)	-	560962..562755 (-)	1794	WP_157339175.1	acyltransferase family protein	-
GO596_RS02820 (GO596_02820)	-	562752..563132 (-)	381	WP_021141401.1	MORN repeat-containing protein	-
GO596_RS02825 (GO596_02825)	-	563149..563580 (-)	432	WP_021141400.1	low molecular weight protein-tyrosine-phosphatase	-
GO596_RS02830 (GO596_02830)	ruvB	563790..564788 (-)	999	WP_021141399.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
GO596_RS02835 (GO596_02835)	comR	564961..565869 (-)	909	WP_049805804.1	helix-turn-helix domain-containing protein	Regulator
GO596_RS02840 (GO596_02840)	purB	566019..567317 (-)	1299	WP_024344772.1	adenylosuccinate lyase	-
GO596_RS02845 (GO596_02845)	purK	567458..568549 (-)	1092	WP_157339176.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
GO596_RS02850 (GO596_02850)	purE	568536..569024 (-)	489	WP_021141395.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
GO596_RS02855 (GO596_02855)	-	569024..569473 (-)	450	WP_157339692.1	DUF523 domain-containing protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37462.01 Da
• Isoelectric Point: 4.6212

>NTDB_id=353967 GO596_RS02830 WP_021141399.1 563790..564788(-) (ruvB) [Streptococcus equinus strain CNU 77-23]
MSRILDNDIMGDEEFVERTLRPQYLKEYIGQDKVKNQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGNGETSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAVEDLTEIVERTADIFEMEIVHEAAQELARRSRGTPRIANRLLKRVRDYAQIMGDGIIT
KDITDKALTMLDVDHEGLDYIDQKILRTMIEVYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATAK
AYEHLGYPYIEK

Nucleotide

• Length: 999 bp

>NTDB_id=353967 GO596_RS02830 WP_021141399.1 563790..564788(-) (ruvB) [Streptococcus equinus strain CNU 77-23]
ATGAGCAGAATTTTAGACAATGATATTATGGGTGATGAAGAGTTTGTGGAACGTACGCTTCGTCCTCAGTATTTAAAAGA
ATATATTGGACAGGATAAGGTAAAAAATCAGCTGAAAATTTTTATTGAAGCTGCTAAATTACGAGATGAGTCATTGGACC
ATGTGCTGTTGTTTGGCCCTCCAGGGTTAGGTAAGACGACAATGGCATTTGTGATTGCTAATGAATTAGGGGTGAATTTA
AAACAAACATCTGGACCGGCTATTGAAAAGGCTGGTGATTTGGTTGCGATTTTGAATGACTTAGAACCAGGTGATGTGTT
GTTTATTGATGAAATTCACCGCATGCCAATGGCAGTAGAAGAAGTGCTTTATAGCGCTATGGAAGATTTCTATATTGATA
TTATGATTGGTAATGGTGAGACTAGTCGTAGTGTCCATTTAGAATTGCCACCTTTTACTTTGATTGGTGCGACAACGCGT
GCAGGAATGCTTTCAAATCCATTGCGTGCACGTTTTGGTATCACTGGTCACATGGAATACTATGCTGTTGAAGATTTGAC
AGAAATTGTAGAACGTACGGCTGATATTTTTGAAATGGAAATTGTCCATGAAGCCGCACAAGAATTAGCGCGACGCAGTC
GTGGAACGCCACGTATCGCTAACCGTTTGTTGAAACGTGTGCGTGATTATGCCCAAATCATGGGCGATGGTATCATCACA
AAAGACATTACAGATAAAGCATTGACGATGCTTGATGTTGATCACGAGGGACTTGATTATATTGACCAAAAAATCTTGCG
CACGATGATTGAAGTTTATAATGGTGGGCCTGTTGGTTTAGGGACTCTTTCTGTTAACATCGCAGAAGAACGTGATACGG
TTGAAGATATGTATGAACCCTATTTGATTCAAAAAGGATTTATCATGCGTACCAGAACTGGGCGCGTGGCAACTGCTAAG
GCATATGAACATTTAGGATATCCTTATATAGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.663	100	0.907
ruvB	Streptococcus pneumoniae R6	90.663	100	0.907
ruvB	Streptococcus pneumoniae D39	90.663	100	0.907
ruvB	Bacillus subtilis subsp. subtilis str. 168	61.61	97.289	0.599
ruvB	Helicobacter pylori 26695	49.39	98.795	0.488
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47