Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E4K03_RS05555 Genome accession   NZ_CP038262
Coordinates   1130383..1130766 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain LEV1449/17Ec     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125383..1135766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4K03_RS05545 (E4K03_05545) - 1128284..1129402 (-) 1119 WP_001260821.1 efflux RND transporter periplasmic adaptor subunit -
  E4K03_RS05550 (E4K03_05550) - 1129462..1130100 (-) 639 WP_002027721.1 hypothetical protein -
  E4K03_RS05555 (E4K03_05555) pilG 1130383..1130766 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  E4K03_RS05560 (E4K03_05560) - 1130790..1131152 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  E4K03_RS05565 (E4K03_05565) - 1131213..1131749 (+) 537 WP_109267471.1 chemotaxis protein CheW -
  E4K03_RS05570 (E4K03_05570) - 1131796..1133874 (+) 2079 WP_000505927.1 methyl-accepting chemotaxis protein -
  E4K03_RS05575 (E4K03_05575) - 1133977..1134897 (+) 921 Protein_1064 response regulator -
  E4K03_RS05580 (E4K03_05580) - 1134894..1135358 (+) 465 WP_000678923.1 hypothetical protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=352871 E4K03_RS05555 WP_000389061.1 1130383..1130766(+) (pilG) [Acinetobacter baumannii strain LEV1449/17Ec]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=352871 E4K03_RS05555 WP_000389061.1 1130383..1130766(+) (pilG) [Acinetobacter baumannii strain LEV1449/17Ec]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATACGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACAAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment