Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | E4K02_RS12295 | Genome accession | NZ_CP038258 |
| Coordinates | 2500389..2500871 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046418.1 | Uniprot ID | A0A0J8UYN7 |
| Organism | Acinetobacter baumannii strain 39741 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2495389..2505871
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K02_RS12260 (E4K02_12260) | - | 2495500..2496531 (+) | 1032 | WP_002125597.1 | lipase secretion chaperone | - |
| E4K02_RS12265 (E4K02_12265) | - | 2496646..2497587 (+) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| E4K02_RS12270 (E4K02_12270) | rplS | 2497639..2498007 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| E4K02_RS12275 (E4K02_12275) | trmD | 2498215..2498955 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| E4K02_RS12280 (E4K02_12280) | rimM | 2499001..2499549 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| E4K02_RS12285 (E4K02_12285) | rpsP | 2499569..2499820 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| E4K02_RS12290 (E4K02_12290) | pilE | 2499967..2500392 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| E4K02_RS12295 (E4K02_12295) | pilY2 | 2500389..2500871 (-) | 483 | WP_001046418.1 | type IV pilin protein | Machinery gene |
| E4K02_RS12300 (E4K02_12300) | pilY1 | 2500884..2504738 (-) | 3855 | WP_000768940.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| E4K02_RS12305 (E4K02_12305) | pilX | 2504750..2505568 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17533.80 Da Isoelectric Point: 8.4817
>NTDB_id=352818 E4K02_RS12295 WP_001046418.1 2500389..2500871(-) (pilY2) [Acinetobacter baumannii strain 39741]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=352818 E4K02_RS12295 WP_001046418.1 2500389..2500871(-) (pilY2) [Acinetobacter baumannii strain 39741]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
95.625 |
100 |
0.956 |
| comE | Acinetobacter baylyi ADP1 |
41.279 |
100 |
0.444 |