Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | EXH44_RS05710 | Genome accession | NZ_CP038145 |
| Coordinates | 1165383..1165724 (+) | Length | 113 a.a. |
| NCBI ID | WP_162856627.1 | Uniprot ID | A0A4P7CI39 |
| Organism | Actinobacillus indolicus strain AIFJ1607 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1160383..1170724
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXH44_RS05690 (EXH44_05690) | rfaC | 1161195..1162175 (-) | 981 | WP_162856623.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| EXH44_RS05695 (EXH44_05695) | waaF | 1162156..1163208 (-) | 1053 | WP_162856624.1 | lipopolysaccharide heptosyltransferase II | - |
| EXH44_RS05700 (EXH44_05700) | - | 1163217..1163621 (-) | 405 | WP_162856625.1 | MliC family protein | - |
| EXH44_RS05705 (EXH44_05705) | - | 1163686..1165107 (-) | 1422 | WP_162856626.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| EXH44_RS05710 (EXH44_05710) | comEA/comE1 | 1165383..1165724 (+) | 342 | WP_162856627.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| EXH44_RS05715 (EXH44_05715) | asd | 1165821..1166714 (+) | 894 | WP_162856628.1 | archaetidylserine decarboxylase | - |
| EXH44_RS05720 (EXH44_05720) | - | 1166761..1167300 (+) | 540 | WP_162856629.1 | DsbE family thiol:disulfide interchange protein | - |
| EXH44_RS05725 (EXH44_05725) | - | 1167306..1167764 (+) | 459 | WP_162856630.1 | cytochrome c-type biogenesis protein | - |
| EXH44_RS05730 (EXH44_05730) | ccmI | 1167764..1168663 (+) | 900 | WP_162856631.1 | c-type cytochrome biogenesis protein CcmI | - |
| EXH44_RS05735 (EXH44_05735) | tpx | 1168704..1169204 (-) | 501 | WP_162856632.1 | thiol peroxidase | - |
| EXH44_RS05740 (EXH44_05740) | - | 1169359..1170081 (+) | 723 | WP_162856633.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12398.30 Da Isoelectric Point: 9.5399
>NTDB_id=351766 EXH44_RS05710 WP_162856627.1 1165383..1165724(+) (comEA/comE1) [Actinobacillus indolicus strain AIFJ1607]
MKKLSRYTFGLLLGLFSATTFAEEKMTTPTEPTPVVTEQVATTQKVNVNVVNINTATAAEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
MKKLSRYTFGLLLGLFSATTFAEEKMTTPTEPTPVVTEQVATTQKVNVNVVNINTATAAEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
Nucleotide
Download Length: 342 bp
>NTDB_id=351766 EXH44_RS05710 WP_162856627.1 1165383..1165724(+) (comEA/comE1) [Actinobacillus indolicus strain AIFJ1607]
ATGAAAAAACTCTCTCGCTATACATTCGGCCTTTTACTTGGACTTTTCTCTGCAACCACATTTGCGGAAGAAAAAATGAC
TACACCAACAGAACCTACGCCAGTAGTGACAGAACAAGTCGCAACAACACAAAAAGTAAATGTGAATGTTGTCAATATCA
ATACCGCTACAGCCGCAGAAATCCAAGATAAGTTGGTCGGTATTGGGGCGAAAAAGGCACAAGCGATTGTGGAATATCGT
GAGAAAAATGGTAAGTTTTTAAATGTTGAACAACTGACTGAAGTTTCTGGTATTGGTAAAGCAACTCTTGAAAAAAATCG
TGATCGAATTGTGATCGAATAA
ATGAAAAAACTCTCTCGCTATACATTCGGCCTTTTACTTGGACTTTTCTCTGCAACCACATTTGCGGAAGAAAAAATGAC
TACACCAACAGAACCTACGCCAGTAGTGACAGAACAAGTCGCAACAACACAAAAAGTAAATGTGAATGTTGTCAATATCA
ATACCGCTACAGCCGCAGAAATCCAAGATAAGTTGGTCGGTATTGGGGCGAAAAAGGCACAAGCGATTGTGGAATATCGT
GAGAAAAATGGTAAGTTTTTAAATGTTGAACAACTGACTGAAGTTTCTGGTATTGGTAAAGCAACTCTTGAAAAAAATCG
TGATCGAATTGTGATCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
90.265 |
100 |
0.903 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
58.261 |
100 |
0.593 |
| comEA | Vibrio cholerae C6706 |
47.253 |
80.531 |
0.381 |
| comEA | Vibrio cholerae strain A1552 |
47.253 |
80.531 |
0.381 |