Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | E3D14_RS18015 | Genome accession | NZ_CP038102 |
| Coordinates | 3823546..3823866 (+) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3818546..3828866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3D14_RS17990 (E3D14_17995) | trhA | 3819171..3819806 (-) | 636 | WP_005318058.1 | PAQR family membrane homeostasis protein TrhA | - |
| E3D14_RS17995 (E3D14_18000) | - | 3820031..3821566 (+) | 1536 | WP_005318060.1 | pyridoxal-dependent decarboxylase | - |
| E3D14_RS18000 (E3D14_18005) | - | 3821652..3822203 (+) | 552 | WP_005318063.1 | septation protein A | - |
| E3D14_RS18005 (E3D14_18010) | - | 3822230..3822526 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| E3D14_RS18010 (E3D14_18015) | cysQ | 3822608..3823378 (-) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| E3D14_RS18015 (E3D14_18020) | comEA | 3823546..3823866 (+) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| E3D14_RS18020 (E3D14_18025) | galU | 3823961..3824872 (+) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| E3D14_RS18025 (E3D14_18030) | - | 3825086..3826483 (+) | 1398 | WP_011898384.1 | peptide MFS transporter | - |
| E3D14_RS18030 (E3D14_18035) | - | 3826515..3827486 (-) | 972 | WP_011898383.1 | response regulator | - |
| E3D14_RS18035 (E3D14_18040) | - | 3827840..3828538 (+) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=351703 E3D14_RS18015 WP_005318073.1 3823546..3823866(+) (comEA) [Aeromonas salmonicida subsp. salmonicida strain SHY16-3432]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=351703 E3D14_RS18015 WP_005318073.1 3823546..3823866(+) (comEA) [Aeromonas salmonicida subsp. salmonicida strain SHY16-3432]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |