Detailed information NTG0350944

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: E2H98_RS12520
• Genome accession: NZ_CP037953
• Coordinates: 2808328..2809392 (+)
• Length: 354 a.a.
• NCBI ID: WP_133589252.1
• Uniprot ID: -
• Organism: Permianibacter aggregans strain HW001
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2803328..2814392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E2H98_RS12505 (E2H98_12450)	coq7	2804553..2805194 (-)	642	WP_133589016.1	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	-
E2H98_RS12510 (E2H98_12455)	-	2805406..2805729 (+)	324	WP_133589014.1	c-type cytochrome	-
E2H98_RS12515 (E2H98_12460)	-	2805748..2808150 (-)	2403	WP_133589012.1	penicillin-binding protein 1A	-
E2H98_RS12520 (E2H98_12465)	pilM	2808328..2809392 (+)	1065	WP_133589252.1	pilus assembly protein PilM	Machinery gene
E2H98_RS12525 (E2H98_12470)	-	2809392..2810021 (+)	630	WP_133589010.1	PilN domain-containing protein	-
E2H98_RS12530 (E2H98_12475)	-	2810018..2810629 (+)	612	WP_133588998.1	type 4a pilus biogenesis protein PilO	-
E2H98_RS12535 (E2H98_12480)	-	2810626..2811168 (+)	543	WP_133588996.1	pilus assembly protein PilP	-
E2H98_RS12540 (E2H98_12485)	pilQ	2811192..2813243 (+)	2052	WP_133588994.1	type IV pilus secretin PilQ	-
E2H98_RS12545 (E2H98_12490)	aroK	2813369..2813890 (+)	522	WP_133588992.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38522.78 Da
• Isoelectric Point: 4.4338

>NTDB_id=350944 E2H98_RS12520 WP_133589252.1 2808328..2809392(+) (pilM) [Permianibacter aggregans strain HW001]
MAQLFGKKKIPLIGLDISSTSCKLLELGKVGSRYRVEAYAVEPLPPDAVVERDIKDTAAVGEAIRRVLARAGTSCKHAAV
AVAGSAVITRNIQVDKDLSEDEIESQIQIEADQYIPYPLEEVALDFSVLGESEKAPDKLEVLVAASRSENVDTRVEALEI
AGLKARVVDVESFAMERAFQLISGQMPNRGEDRVIAVVDMGASMTSLSVMRNFKTIYTREQVFGGTQLTEEIQRRYGLSY
EEAGMAKKQGGLPDDYETEVLQPFKESIIQQISRSLQFFYAASQYGEIDHIVLAGGCAAIEGLDELVQERLGTSTSLANP
FADMSIASRVNAQQLASDAPSLMISCGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=350944 E2H98_RS12520 WP_133589252.1 2808328..2809392(+) (pilM) [Permianibacter aggregans strain HW001]
CTGGCGCAACTCTTCGGTAAGAAGAAAATCCCTTTGATCGGTTTGGACATCTCGTCCACGTCGTGCAAGTTGCTTGAACT
GGGGAAGGTCGGGTCGCGTTACCGGGTCGAAGCCTATGCTGTCGAGCCGTTGCCGCCGGATGCCGTCGTCGAGCGGGATA
TCAAAGATACGGCGGCGGTTGGCGAAGCCATTCGCCGGGTGTTGGCCCGTGCTGGCACCAGCTGCAAACATGCGGCCGTC
GCGGTCGCCGGTTCGGCAGTCATTACCCGCAATATCCAGGTTGATAAAGACCTGTCCGAAGACGAAATCGAAAGCCAGAT
TCAAATCGAAGCCGACCAATATATTCCTTATCCATTGGAAGAAGTCGCGCTGGACTTCAGCGTGCTCGGCGAATCGGAAA
AAGCGCCGGACAAACTGGAAGTGCTGGTTGCCGCTTCCCGTTCCGAAAACGTTGATACCCGTGTCGAGGCGCTGGAAATC
GCTGGTCTGAAAGCGCGTGTTGTGGACGTCGAATCGTTCGCGATGGAGCGAGCCTTTCAGCTGATTTCAGGGCAGATGCC
CAATCGGGGCGAGGATCGTGTGATCGCCGTCGTCGACATGGGCGCCTCGATGACATCGCTGTCCGTCATGCGCAATTTCA
AAACCATCTACACTCGTGAACAGGTGTTCGGTGGTACTCAATTAACCGAAGAGATTCAGCGTCGCTATGGCCTTTCCTAT
GAAGAGGCCGGTATGGCGAAAAAGCAGGGCGGCCTGCCTGATGATTATGAAACCGAGGTATTGCAGCCGTTCAAGGAATC
GATCATTCAGCAAATCAGCCGCTCGCTGCAGTTCTTCTATGCAGCCAGCCAATATGGCGAAATCGACCATATCGTGCTGG
CCGGTGGCTGTGCCGCAATAGAGGGGCTCGATGAATTGGTTCAGGAGCGCCTTGGCACCTCAACCAGTCTGGCCAATCCG
TTTGCCGACATGTCGATTGCCTCGCGTGTCAATGCCCAGCAGCTGGCATCGGATGCCCCGTCGTTGATGATTAGCTGTGG
CTTGGCCCTACGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.107	100	0.531
comM	Acinetobacter nosocomialis M2	52.825	100	0.528
comM	Acinetobacter baylyi ADP1	51.412	100	0.514
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469