Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | IA74_RS10850 | Genome accession | NZ_CP036553 |
| Coordinates | 2602822..2603280 (+) | Length | 152 a.a. |
| NCBI ID | WP_032531838.1 | Uniprot ID | A0A0I9UL52 |
| Organism | Bacteroides fragilis strain DCMOUH0067B | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2597822..2608280
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IA74_RS10835 (IA74_010825) | - | 2599596..2599871 (-) | 276 | WP_005776335.1 | HU family DNA-binding protein | - |
| IA74_RS10840 (IA74_010830) | mutY | 2600076..2601122 (+) | 1047 | WP_032531837.1 | A/G-specific adenine glycosylase | - |
| IA74_RS10845 (IA74_010835) | - | 2601166..2602734 (+) | 1569 | WP_022013012.1 | arylsulfatase | - |
| IA74_RS10850 (IA74_010840) | ssb | 2602822..2603280 (+) | 459 | WP_032531838.1 | single-stranded DNA-binding protein | Machinery gene |
| IA74_RS10855 (IA74_010845) | - | 2603416..2604762 (+) | 1347 | WP_022013013.1 | gliding motility-associated protein GldE | - |
| IA74_RS10860 (IA74_010850) | - | 2604770..2605420 (+) | 651 | WP_032531919.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| IA74_RS23995 | - | 2605441..2607747 (+) | 2307 | WP_032531920.1 | hypothetical protein | - |
| IA74_RS10870 (IA74_010860) | - | 2607830..2608045 (-) | 216 | WP_005776344.1 | (4Fe-4S)-binding protein | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 16753.73 Da Isoelectric Point: 5.7512
>NTDB_id=349568 IA74_RS10850 WP_032531838.1 2602822..2603280(+) (ssb) [Bacteroides fragilis strain DCMOUH0067B]
MSVNKVILIGNVGKDPEVRYLDTGIAVASFPLATTDRAYTLSNGTQVPERTEWHNLVLWRGLAETAEKYVHKGDKLYVEG
KIRTRSYDDQSGAKRYVTEIFVDNMEMLTPKGAGVGSYAPSQQQAAAPVRPQPQQPQQSASSQDNPADDLPF
MSVNKVILIGNVGKDPEVRYLDTGIAVASFPLATTDRAYTLSNGTQVPERTEWHNLVLWRGLAETAEKYVHKGDKLYVEG
KIRTRSYDDQSGAKRYVTEIFVDNMEMLTPKGAGVGSYAPSQQQAAAPVRPQPQQPQQSASSQDNPADDLPF
Nucleotide
Download Length: 459 bp
>NTDB_id=349568 IA74_RS10850 WP_032531838.1 2602822..2603280(+) (ssb) [Bacteroides fragilis strain DCMOUH0067B]
ATGTCAGTAAATAAAGTGATATTGATAGGAAATGTCGGTAAAGACCCTGAAGTGAGATATTTGGATACGGGTATTGCTGT
GGCCAGTTTTCCTTTGGCTACAACCGACCGTGCATATACTTTGTCTAATGGTACACAAGTGCCTGAGCGGACTGAATGGC
ACAATCTTGTACTTTGGCGAGGACTGGCAGAAACTGCCGAGAAATATGTACATAAAGGTGATAAACTCTATGTGGAAGGT
AAGATAAGAACTCGTTCTTATGATGACCAGAGTGGAGCAAAACGCTATGTTACCGAGATATTTGTAGATAATATGGAAAT
GCTGACTCCGAAAGGTGCCGGTGTCGGATCGTATGCTCCGTCACAGCAGCAGGCTGCTGCTCCCGTACGGCCTCAACCGC
AACAACCGCAGCAATCGGCATCTTCACAGGATAATCCGGCAGACGATCTGCCGTTTTAA
ATGTCAGTAAATAAAGTGATATTGATAGGAAATGTCGGTAAAGACCCTGAAGTGAGATATTTGGATACGGGTATTGCTGT
GGCCAGTTTTCCTTTGGCTACAACCGACCGTGCATATACTTTGTCTAATGGTACACAAGTGCCTGAGCGGACTGAATGGC
ACAATCTTGTACTTTGGCGAGGACTGGCAGAAACTGCCGAGAAATATGTACATAAAGGTGATAAACTCTATGTGGAAGGT
AAGATAAGAACTCGTTCTTATGATGACCAGAGTGGAGCAAAACGCTATGTTACCGAGATATTTGTAGATAATATGGAAAT
GCTGACTCCGAAAGGTGCCGGTGTCGGATCGTATGCTCCGTCACAGCAGCAGGCTGCTGCTCCCGTACGGCCTCAACCGC
AACAACCGCAGCAATCGGCATCTTCACAGGATAATCCGGCAGACGATCTGCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
41.573 |
100 |
0.487 |
| ssb | Neisseria meningitidis MC58 |
39.205 |
100 |
0.454 |
| ssb | Neisseria gonorrhoeae MS11 |
39.205 |
100 |
0.454 |
| ssb | Glaesserella parasuis strain SC1401 |
37.079 |
100 |
0.434 |