Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EZZ79_RS22625 | Genome accession | NZ_CP036493 |
| Coordinates | 5245656..5246225 (-) | Length | 189 a.a. |
| NCBI ID | WP_003426596.1 | Uniprot ID | A0A0K8M6E3 |
| Organism | Pseudomonas syringae strain Psy33 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5240656..5251225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EZZ79_RS22605 (EZZ79_23555) | - | 5241026..5242594 (-) | 1569 | WP_141251820.1 | asparagine synthase-related protein | - |
| EZZ79_RS22610 (EZZ79_23560) | - | 5242685..5242870 (-) | 186 | WP_139218885.1 | hypothetical protein | - |
| EZZ79_RS22615 (EZZ79_23565) | - | 5243073..5244830 (+) | 1758 | WP_016569108.1 | ABC transporter ATP-binding protein | - |
| EZZ79_RS22620 (EZZ79_23570) | - | 5244961..5245404 (-) | 444 | WP_024664049.1 | hypothetical protein | - |
| EZZ79_RS22625 (EZZ79_23575) | ssb | 5245656..5246225 (-) | 570 | WP_003426596.1 | single-stranded DNA-binding protein | Machinery gene |
| EZZ79_RS22630 (EZZ79_23580) | - | 5246235..5247629 (-) | 1395 | WP_003426593.1 | MFS transporter | - |
| EZZ79_RS22635 (EZZ79_23585) | uvrA | 5247759..5250593 (+) | 2835 | WP_003317094.1 | excinuclease ABC subunit UvrA | - |
| EZZ79_RS22640 (EZZ79_23590) | bfr | 5250688..5251152 (-) | 465 | WP_003317095.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 20974.10 Da Isoelectric Point: 5.9404
>NTDB_id=349105 EZZ79_RS22625 WP_003426596.1 5245656..5246225(-) (ssb) [Pseudomonas syringae strain Psy33]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQQGQGGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQQPP
QQRDSRPAPQQQAPQPAADFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQQGQGGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQQPP
QQRDSRPAPQQQAPQPAADFDSFDDDIPF
Nucleotide
Download Length: 570 bp
>NTDB_id=349105 EZZ79_RS22625 WP_003426596.1 5245656..5246225(-) (ssb) [Pseudomonas syringae strain Psy33]
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACTGACAAGCAGTCCGGTCAGAAAGTCGAAAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAGGTCGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACTGAAATCGTCGTCGACATGCAGGGCAC
CATGCAACTGCTGGGCGGCCGTCCACAGGGCGACGCTCAACAAGGTCAGGGCGGTGGCGGCAACTACAACCAGTCCGCAC
CTCGTCCACAGCAGTCGCGCCCACAACAGTCGGCGCCGCAGCAATCCGCACCTCAGCAGAACTACAACCAGCAGCCGCCA
CAACAGCGCGACTCGCGCCCAGCGCCGCAACAACAAGCGCCGCAGCCAGCTGCTGACTTTGATAGCTTTGATGATGATAT
TCCGTTCTGA
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACTGACAAGCAGTCCGGTCAGAAAGTCGAAAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAGGTCGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACTGAAATCGTCGTCGACATGCAGGGCAC
CATGCAACTGCTGGGCGGCCGTCCACAGGGCGACGCTCAACAAGGTCAGGGCGGTGGCGGCAACTACAACCAGTCCGCAC
CTCGTCCACAGCAGTCGCGCCCACAACAGTCGGCGCCGCAGCAATCCGCACCTCAGCAGAACTACAACCAGCAGCCGCCA
CAACAGCGCGACTCGCGCCCAGCGCCGCAACAACAAGCGCCGCAGCCAGCTGCTGACTTTGATAGCTTTGATGATGATAT
TCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
55.208 |
100 |
0.561 |
| ssb | Glaesserella parasuis strain SC1401 |
47.368 |
100 |
0.476 |
| ssb | Neisseria meningitidis MC58 |
44.681 |
99.471 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
44.681 |
99.471 |
0.444 |