Detailed information NTG0348832

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EY643_RS18620
• Genome accession: NZ_CP036422
• Coordinates: 4113420..4114484 (-)
• Length: 354 a.a.
• NCBI ID: WP_153240663.1
• Uniprot ID: -
• Organism: Halioglobus maricola strain IMCC14385
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4108420..4119484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EY643_RS18595 (EY643_18565)	aroK	4109025..4109507 (-)	483	WP_338035567.1	shikimate kinase AroK	-
EY643_RS18600 (EY643_18570)	pilQ	4109540..4111654 (-)	2115	WP_240732762.1	type IV pilus secretin PilQ	-
EY643_RS18605 (EY643_18575)	-	4111713..4112246 (-)	534	WP_420841629.1	pilus assembly protein PilP	-
EY643_RS18610 (EY643_18580)	-	4112243..4112851 (-)	609	WP_153240661.1	type 4a pilus biogenesis protein PilO	-
EY643_RS18615 (EY643_18585)	-	4112854..4113420 (-)	567	WP_153240662.1	PilN domain-containing protein	-
EY643_RS18620 (EY643_18590)	pilM	4113420..4114484 (-)	1065	WP_153240663.1	pilus assembly protein PilM	Machinery gene
EY643_RS18625 (EY643_18595)	-	4114660..4117101 (+)	2442	WP_153240664.1	penicillin-binding protein 1A	-
EY643_RS18630 (EY643_18600)	-	4117148..4118398 (-)	1251	WP_153240665.1	malic enzyme-like NAD(P)-binding protein	-
EY643_RS18635 (EY643_18605)	-	4118470..4119327 (-)	858	WP_170287471.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38095.09 Da
• Isoelectric Point: 4.1107

>NTDB_id=348832 EY643_RS18620 WP_153240663.1 4113420..4114484(-) (pilM) [Halioglobus maricola strain IMCC14385]
MLGLIGKRKATPVLGLDISSTTVKLLELSYSGDRYRVESYAVSSLSQDAVIEKNVNDVDGVANAIRNVVAQSRTKLKTAA
AAVSGSSVITKMIDMPEGLSEDDMETQLTLEADQYIPYPLEEVAIDFEVQGESPEHAGQVEVLLAACRRETIDARVDAID
GADIAPKIMDVEAYAMERAYSLISSQLDLDDDATVAVVDIGATMTTLSVLHGGQTIYTREQLFGGKQLTDEIMRRYGLPL
EEAGLAKKQGGLPDDYEPEVLEPFKDAVVQQVARSLQFFFSSSQYNDVDYIILAGGVSSMEGLSELVQDKLGTPTKVANP
FADMSISSKVNAVALSSDAPAMMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=348832 EY643_RS18620 WP_153240663.1 4113420..4114484(-) (pilM) [Halioglobus maricola strain IMCC14385]
TTGCTTGGTCTAATAGGGAAAAGAAAGGCGACACCGGTTCTGGGGCTTGATATCAGCTCGACTACGGTCAAGTTGCTAGA
GTTGAGCTACTCAGGGGATCGCTACCGCGTAGAAAGTTATGCGGTAAGTTCGCTATCGCAGGACGCGGTGATCGAAAAAA
ACGTGAACGATGTGGATGGCGTTGCTAACGCTATTCGCAACGTCGTTGCCCAGTCCAGAACCAAACTCAAAACAGCGGCT
GCTGCCGTCTCGGGATCGTCGGTCATCACCAAGATGATTGATATGCCTGAGGGGCTCAGTGAGGATGACATGGAGACCCA
GCTCACGCTGGAGGCCGACCAGTACATCCCCTACCCGCTTGAGGAAGTCGCGATCGACTTCGAGGTGCAGGGCGAGTCAC
CTGAGCATGCCGGGCAGGTAGAGGTTCTGCTCGCCGCTTGCAGGCGGGAGACGATTGACGCCAGGGTCGACGCCATAGAC
GGCGCCGACATCGCACCTAAAATCATGGATGTCGAGGCTTATGCGATGGAGCGGGCATACTCGCTTATCAGCAGCCAGCT
GGACCTCGATGACGACGCCACTGTTGCGGTCGTCGACATCGGCGCCACCATGACCACGCTCAGCGTGCTCCATGGCGGCC
AGACGATCTATACACGGGAACAGCTTTTCGGCGGCAAACAGCTGACGGACGAAATCATGCGTCGTTACGGCCTGCCCCTT
GAAGAGGCCGGCCTTGCCAAGAAGCAGGGCGGCTTGCCAGACGACTATGAGCCGGAAGTATTGGAACCCTTCAAAGACGC
CGTGGTGCAGCAGGTCGCGCGCTCACTGCAGTTTTTCTTCTCTTCCAGTCAGTACAACGATGTCGACTACATTATTCTCG
CCGGTGGGGTTTCCTCGATGGAAGGCCTGTCGGAACTGGTTCAGGACAAGCTCGGCACTCCCACCAAGGTAGCGAACCCC
TTCGCTGACATGTCAATTTCGTCAAAGGTAAACGCCGTGGCATTGAGCAGCGACGCTCCTGCCATGATGATTGCCTGCGG
CCTTGCCCTGCGGAGTTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (15-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	52.047	96.61	0.503
comM	Acinetobacter nosocomialis M2	52.047	96.61	0.503
comM	Acinetobacter baylyi ADP1	49.425	98.305	0.486
pilM	Legionella pneumophila strain ERS1305867	46.197	100	0.463