Detailed information NTG0034737

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PAU_RS20780
• Genome accession: NC_012962
• Coordinates: 4853759..4854844 (-)
• Length: 361 a.a.
• NCBI ID: WP_015836251.1
• Uniprot ID: -
• Organism: Photorhabdus asymbiotica
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4848759..4859844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PAU_RS20755 (PAT0678)	-	4850968..4851513 (+)	546	WP_015836247.1	gamma carbonic anhydrase family protein	-
PAU_RS20760	-	4851489..4851749 (-)	261	WP_041382565.1	DUF1488 domain-containing protein	-
PAU_RS20765 (PAT0679)	aroE	4851746..4852564 (-)	819	WP_015836248.1	shikimate dehydrogenase	-
PAU_RS20770 (PAT0680)	tsaC	4852571..4853140 (-)	570	WP_015836249.1	L-threonylcarbamoyladenylate synthase type 1 TsaC	-
PAU_RS20775 (PAT0681)	-	4853155..4853694 (-)	540	WP_015836250.1	topoisomerase DNA-binding C4 zinc finger domain-containing protein	-
PAU_RS20780 (PAT0682)	dprA	4853759..4854844 (-)	1086	WP_015836251.1	DNA-protecting protein DprA	Machinery gene
PAU_RS20785 (PAT0683)	def	4854977..4855489 (+)	513	WP_015836252.1	peptide deformylase	-
PAU_RS20790 (PAT0684)	fmt	4855514..4856464 (+)	951	WP_015836253.1	methionyl-tRNA formyltransferase	-
PAU_RS20795 (PAT0685)	rsmB	4856503..4857792 (+)	1290	WP_015836254.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PAU_RS20800 (PAT0686)	trkA	4857848..4859224 (+)	1377	WP_015836255.1	Trk system potassium transporter TrkA	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39514.82 Da
• Isoelectric Point: 7.3604

>NTDB_id=34737 PAU_RS20780 WP_015836251.1 4853759..4854844(-) (dprA) [Photorhabdus asymbiotica]
MEAMEVWLRMKMISHLATEKAVNIVERLLHAGNRYSTVLKDSGLSPVQCLQFTKANKTVLTSCLKWLEQSEHHLLTYSHP
SYPLLLKQIHAPPLALFVSGKLELLLKKQIAMVGSRTASYYGEKWGKIFAGELVGHELVITSGLAIGIDGICHRSALDSG
GETIAILGSGLGHIYPHRHVSLAKQIEENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEASKNSGSLITARCAL
EQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATSAMDIVEHVYGSLQWLHMEGTKQEVKPQFEQTELPFADVLVNVSDEI
TSVDIIAQRSLLPINEVMAKLLELELLGKVAVVAGGYVRVN

Nucleotide

• Length: 1086 bp

>NTDB_id=34737 PAU_RS20780 WP_015836251.1 4853759..4854844(-) (dprA) [Photorhabdus asymbiotica]
ATGGAAGCTATGGAAGTATGGTTGCGAATGAAGATGATCTCTCATTTGGCAACAGAAAAAGCAGTAAATATTGTAGAAAG
GTTATTGCATGCCGGGAATCGTTATTCCACTGTACTGAAAGATAGTGGGTTATCACCAGTACAATGTTTGCAATTTACTA
AAGCAAATAAAACTGTACTAACTTCGTGTTTAAAGTGGCTTGAACAGTCAGAACATCATTTATTGACATATTCTCACCCT
TCGTATCCACTTCTATTAAAGCAGATACATGCTCCACCTCTTGCGCTTTTTGTATCAGGAAAATTAGAACTCCTTCTAAA
GAAACAGATAGCAATGGTTGGGAGTCGGACAGCAAGCTATTATGGAGAAAAATGGGGAAAAATTTTTGCGGGCGAATTGG
TTGGACATGAGTTAGTTATAACTAGTGGTTTAGCTATCGGTATTGATGGTATTTGTCACCGTTCTGCACTGGATAGTGGA
GGTGAAACAATTGCAATACTAGGTAGTGGGCTTGGGCATATTTATCCACATAGACATGTGTCGTTAGCAAAACAGATAGA
AGAAAATGGCGCTCTTGTTTCTGAATTTTTTCCGGACACTCCTCCGCGCGCAAAAAATTTTCCTAGAAGGAATCGGATTA
TCAGTGGGTTAAGTTCGGCAGTTATCGTTGTAGAAGCGAGTAAAAATAGTGGGTCGTTAATTACAGCACGTTGTGCACTT
GAACAAGGAAGAGATGTATTTGCATTACCCGGTCTTTTGGGTAATTCAGTGAGTGAAGGGAATCATTGGTTAATAAAGCA
AGGTGCATATCTGGCTACAAGCGCAATGGATATTGTAGAACATGTTTATGGTTCACTGCAGTGGTTGCATATGGAAGGAA
CAAAACAAGAAGTAAAGCCACAATTTGAGCAAACTGAGTTGCCATTTGCTGATGTACTAGTTAACGTAAGTGACGAGATA
ACTTCTGTTGATATCATTGCTCAGCGTTCTTTATTACCTATAAATGAGGTAATGGCAAAGCTCCTTGAACTGGAATTACT
GGGTAAAGTGGCTGTAGTTGCTGGTGGTTATGTCCGTGTAAATTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-356)

• DNA recombination-mediator protein A (DNA_processg_A) (67-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	47.684	100	0.485
dprA	Glaesserella parasuis strain SC1401	48.657	92.798	0.452
dprA	Vibrio cholerae strain A1552	46.729	88.92	0.416
dprA	Legionella pneumophila strain ERS1305867	43.558	90.305	0.393
dprA	Haemophilus influenzae Rd KW20	51.587	69.806	0.36