Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW54_RS19685 Genome accession   NZ_CP036094
Coordinates   3940713..3941171 (+) Length   152 a.a.
NCBI ID   WP_000804859.1    Uniprot ID   A0A1V6LJT3
Organism   Bacillus toyonensis strain JAS22/1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3935713..3946171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW54_RS19670 (EXW54_20140) - 3936376..3936612 (+) 237 WP_000283739.1 hypothetical protein -
  EXW54_RS19675 (EXW54_20145) - 3936781..3938889 (-) 2109 WP_000421687.1 polyphosphate kinase -
  EXW54_RS19680 (EXW54_20150) - 3939007..3940536 (-) 1530 WP_000661381.1 Ppx/GppA family phosphatase -
  EXW54_RS19685 (EXW54_20155) kre 3940713..3941171 (+) 459 WP_000804859.1 YkyB family protein Regulator
  EXW54_RS19690 (EXW54_20160) - 3941203..3941865 (-) 663 WP_000922477.1 YkyA family protein -
  EXW54_RS19695 (EXW54_20165) - 3942511..3943164 (-) 654 WP_000680808.1 diguanylate cyclase -
  EXW54_RS19700 (EXW54_20170) - 3943329..3943562 (+) 234 WP_000939445.1 SPP1 phage holin family protein -
  EXW54_RS19705 (EXW54_20175) - 3943594..3944094 (-) 501 WP_000708175.1 hypothetical protein -
  EXW54_RS19710 (EXW54_20180) - 3944529..3946070 (+) 1542 WP_000449889.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17800.47 Da        Isoelectric Point: 10.6181

>NTDB_id=346686 EXW54_RS19685 WP_000804859.1 3940713..3941171(+) (kre) [Bacillus toyonensis strain JAS22/1]
MKPSQPQSQLQNQHPINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYYFHIPPTKEDFRNLPHLGHLESSYRNPKTTLSLTVSKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=346686 EXW54_RS19685 WP_000804859.1 3940713..3941171(+) (kre) [Bacillus toyonensis strain JAS22/1]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATCCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCCAAAGCTGCAACTAACCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTAATCGCCGAAA
AAAAAGCAATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGGTTA
GGCGATTATTATTTCCACATCCCTCCTACGAAAGAAGATTTTCGAAACCTACCACATCTTGGTCATCTTGAATCCTCCTA
CCGAAACCCGAAAACAACCTTGTCTTTAACAGTTTCCAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGCCGCACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LJT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.487

74.342

0.487

Multiple sequence alignment