Detailed information NTG0346686

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: GII86_RS14565
• Genome accession: NZ_CP045816
• Coordinates: 2692846..2693451 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain P5_B2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2687846..2698451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII86_RS14535 (GII86_14535)	-	2688659..2689048 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
GII86_RS14540 (GII86_14540)	yajC	2689105..2689371 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
GII86_RS14545 (GII86_14545)	tgt	2689408..2690553 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
GII86_RS14550 (GII86_14550)	queA	2690580..2691608 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
GII86_RS14555 (GII86_14555)	yrzS	2691638..2691838 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
GII86_RS14560 (GII86_14560)	ruvB	2691831..2692835 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
GII86_RS14565 (GII86_14565)	ruvA	2692846..2693451 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
GII86_RS14570 (GII86_14570)	bofC	2693590..2694102 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
GII86_RS14575 (GII86_14575)	csbX	2694150..2695457 (-)	1308	WP_153952973.1	MFS transporter	-
GII86_RS14580 (GII86_14580)	iolG	2695528..2696556 (-)	1029	WP_015251559.1	inositol 2-dehydrogenase	-
GII86_RS14585 (GII86_14585)	yrzF	2696794..2697441 (+)	648	WP_015251558.1	phosphotransferase	-
GII86_RS14590 (GII86_14590)	-	2697487..2697609 (-)	123	WP_003229707.1	hypothetical protein	-
GII86_RS22260	-	2697694..2697768 (+)	75	Protein_2867	hypothetical protein	-
GII86_RS14595 (GII86_14595)	-	2697772..2698140 (+)	369	WP_257724450.1	DUF5412 domain-containing protein	-
GII86_RS14600 (GII86_14600)	-	2698147..2698287 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=346686 GII86_RS14565 WP_003229717.1 2692846..2693451(-) (ruvA) [Bacillus subtilis strain P5_B2]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=346686 GII86_RS14565 WP_003229717.1 2692846..2693451(-) (ruvA) [Bacillus subtilis strain P5_B2]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408