Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW59_RS14930 | Genome accession | NZ_CP036084 |
| Coordinates | 2014508..2014795 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain JAS1004 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2009508..2019795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW59_RS14910 (EXW59_15235) | - | 2010692..2010934 (+) | 243 | WP_133116641.1 | DUF4083 domain-containing protein | - |
| EXW59_RS14915 (EXW59_15240) | - | 2010919..2011380 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW59_RS14920 (EXW59_15245) | nadE | 2011425..2012243 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW59_RS14925 (EXW59_15250) | - | 2012508..2014388 (+) | 1881 | WP_016102182.1 | ABC transporter permease | - |
| EXW59_RS14930 (EXW59_15255) | abrB | 2014508..2014795 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW59_RS14935 (EXW59_15260) | - | 2015130..2016080 (+) | 951 | WP_016102180.1 | serine protease | - |
| EXW59_RS14940 (EXW59_15265) | - | 2016121..2016429 (-) | 309 | WP_016102179.1 | helix-turn-helix transcriptional regulator | - |
| EXW59_RS14945 (EXW59_15270) | - | 2016537..2017472 (+) | 936 | WP_098635371.1 | aldo/keto reductase | - |
| EXW59_RS33130 (EXW59_15275) | - | 2017522..2017726 (+) | 205 | Protein_1978 | hypothetical protein | - |
| EXW59_RS14955 (EXW59_15280) | - | 2017757..2017981 (-) | 225 | WP_098635370.1 | hypothetical protein | - |
| EXW59_RS14960 (EXW59_15285) | - | 2018066..2018413 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW59_RS14965 (EXW59_15290) | - | 2018610..2019137 (+) | 528 | WP_098635369.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346527 EXW59_RS14930 WP_002012401.1 2014508..2014795(+) (abrB) [Bacillus mycoides strain JAS1004]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346527 EXW59_RS14930 WP_002012401.1 2014508..2014795(+) (abrB) [Bacillus mycoides strain JAS1004]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |