Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW35_RS00220 | Genome accession | NZ_CP035965 |
| Coordinates | 40495..40779 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain BPN09/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35495..45779
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW35_RS00185 (EXW35_00185) | tmk | 35649..36275 (+) | 627 | WP_002130202.1 | dTMP kinase | - |
| EXW35_RS00190 (EXW35_00190) | holB | 36311..37294 (+) | 984 | WP_215550730.1 | DNA polymerase III subunit delta' | - |
| EXW35_RS00195 (EXW35_00195) | - | 37300..38127 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW35_RS00200 (EXW35_00200) | yabA | 38142..38492 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW35_RS00205 (EXW35_00205) | - | 38613..39353 (+) | 741 | WP_002130206.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW35_RS00210 (EXW35_00210) | - | 39340..39630 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW35_RS00215 (EXW35_00215) | rsmI | 39599..40474 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW35_RS00220 (EXW35_00220) | abrB | 40495..40779 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW35_RS00225 (EXW35_00225) | metG | 41271..43280 (+) | 2010 | WP_215550731.1 | methionine--tRNA ligase | - |
| EXW35_RS00230 (EXW35_00230) | - | 43446..44213 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW35_RS00235 (EXW35_00235) | rnmV | 44474..45031 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=345345 EXW35_RS00220 WP_000843037.1 40495..40779(-) (abrB) [Bacillus mycoides strain BPN09/1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=345345 EXW35_RS00220 WP_000843037.1 40495..40779(-) (abrB) [Bacillus mycoides strain BPN09/1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |